Strain identifier

BacDive ID: 155789

Type strain: No

Species: Streptococcus sanguinis

NCBI tax ID(s): 1305 (species)

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General

@ref: 61910

BacDive-ID: 155789

keywords: genome sequence, Bacteria, microaerophile, mesophilic

description: Streptococcus sanguinis CCUG 59327 is a microaerophile, mesophilic bacterium that was isolated from Human blood,endocarditis.

NCBI tax id

  • NCBI tax id: 1305
  • Matching level: species

doi: 10.13145/bacdive155789.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Streptococcaceae
  • genus: Streptococcus
  • species: Streptococcus sanguinis
  • full scientific name: Streptococcus sanguinis corrig. White and Niven 1946 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Streptococcus sanguis

@ref: 61910

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus sanguinis

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram stain
69480no91.622
69480100positive

Culture and growth conditions

culture temp

  • @ref: 61910
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 61910
  • oxygen tolerance: microaerophile

spore formation

@refspore formationconfidence
69480no99.982
69481no100

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838129016arginine-hydrolysis
6838116988D-ribose-builds acid from
6838116899D-mannitol-builds acid from
6838130911sorbitol-builds acid from
6838117716lactose+builds acid from
6838127082trehalose+builds acid from
6838116634raffinose-builds acid from
6838117992sucrose+builds acid from
6838130849L-arabinose-builds acid from
6838118333D-arabitol-builds acid from
6838140585alpha-cyclodextrin-builds acid from
68381606565hippurate-hydrolysis
6838128087glycogen-builds acid from
6838127941pullulan+builds acid from
6838117306maltose+builds acid from
6838128053melibiose-builds acid from
683816731melezitose-builds acid from
68381320055methyl beta-D-glucopyranoside-builds acid from
6838116443D-tagatose-builds acid from
6838116199urea-hydrolysis

metabolite production

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: no

metabolite tests

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
68381urease-3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase+
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase-3.4.19.3
68381beta-galactosidase-3.2.1.23
68381Alanyl-Phenylalanyl-Proline arylamidase+
68381alkaline phosphatase-3.1.3.1
68381alpha-galactosidase-3.2.1.22
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase+3.2.1.21
68381arginine dihydrolase-3.5.3.6

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
61910-+-------++-+----+---+--++------

Isolation, sampling and environmental information

isolation

  • @ref: 61910
  • sample type: Human blood,endocarditis
  • sampling date: 1993
  • geographic location: Copenhagen,SSI
  • country: Denmark
  • origin.country: DNK
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood
#Infection#Inflammation
#Infection#Patient

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Streptococcus sanguinis SK408888818.3wgspatric888818
66792Streptococcus sanguinis SK408 CCUG 59327GCA_000195045scaffoldncbi888818

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno95.068no
flagellatedno95.312no
gram-positiveyes92.476no
anaerobicno94.097yes
halophileyes67.608no
spore-formingno87.923no
thermophileno99.518yes
glucose-utilyes85.664no
aerobicno95.175yes
glucose-fermentyes79.052no

External links

@ref: 61910

culture collection no.: CCUG 59327

straininfo link

  • @ref: 109164
  • straininfo: 410983

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
61910Curators of the CCUGhttps://www.ccug.se/strain?id=59327Culture Collection University of Gothenburg (CCUG) (CCUG 59327)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68381Automatically annotated from API rID32STR
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
109164Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID410983.1