Strain identifier
version 8.1 (current version)
General
@ref: 61478
BacDive-ID: 155468
keywords: genome sequence, Bacteria, aerobe, mesophilic
description: Acinetobacter johnsonii CCUG 57820 is an aerobe, mesophilic bacterium that was isolated from Human perineum.
NCBI tax id
- NCBI tax id: 40214
- Matching level: species
doi: 10.13145/bacdive155468.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Acinetobacter
- species: Acinetobacter johnsonii
- full scientific name: Acinetobacter johnsonii Bouvet and Grimont 1986
@ref: 61478
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter johnsonii
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 93.783 | |
| 69480 | 99.806 | negative |
Culture and growth conditions
culture temp
- @ref: 61478
- growth: positive
- type: growth
- temperature: 30-37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 61478
- oxygen tolerance: aerobe
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | no | 99.977 |
| 69481 | no | 100 |
Isolation, sampling and environmental information
isolation
- @ref: 61478
- sample type: Human perineum
- sampling date: 1993
- geographic location: Cologne
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
| Cat1 | Cat2 |
|---|---|
| #Host | #Human |
| #Infection | #Patient |
Sequence information
Genome sequences
- @ref: 66792
- description: Acinetobacter johnsonii SH046
- accession: 575586.4
- assembly level: wgs
- database: patric
- NCBI tax ID: 575586
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| gram-positive | no | 97.573 | no |
| anaerobic | no | 98.254 | yes |
| halophile | no | 86.983 | no |
| spore-forming | no | 96.725 | no |
| glucose-util | no | 89.234 | no |
| thermophile | no | 99.911 | yes |
| motile | no | 92.54 | no |
| flagellated | no | 96.984 | no |
| aerobic | yes | 92.634 | yes |
| glucose-ferment | no | 90.683 | no |
External links
@ref: 61478
culture collection no.: CCUG 57820
straininfo link
- @ref: 108899
- straininfo: 410339
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 61478 | Curators of the CCUG | https://www.ccug.se/strain?id=57820 | Culture Collection University of Gothenburg (CCUG) (CCUG 57820) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 108899 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID410339.1 |