Strain identifier

BacDive ID: 155355

Type strain: No

Species: Aggregatibacter segnis

NCBI tax ID(s): 739 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 61327

BacDive-ID: 155355

keywords: Bacteria, microaerophile, mesophilic

description: Aggregatibacter segnis CCUG 57436 is a microaerophile, mesophilic bacterium that was isolated from Human infection,71-yr-old man.

NCBI tax id

  • NCBI tax id: 739
  • Matching level: species

doi: 10.13145/bacdive155355.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Aggregatibacter
  • species: Aggregatibacter segnis
  • full scientific name: Aggregatibacter segnis (Kilian 1977) Nørskov-Lauritsen and Kilian 2006

  • synonyms

    • @ref: 20215
    • synonym: Haemophilus segnis

@ref: 61327

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Aggregatibacter

species: Aggregatibacter segnis

type strain: no

Culture and growth conditions

culture temp

  • @ref: 61327
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 61327
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    61327C12:00.212
    61327C14:022.514
    61327C16:028.216
    61327C18:01.118
    61327C13:0 ISO 2OH0.313.814
    61327C14:0 3OH/C16:1 ISO I8.515.485
    61327C16:1 ω7c30.715.819
    61327C16:1 ω9c0.315.774
    61327C18:1 ω7c /12t/9t0.617.824
    61327C18:1 ω9c2.517.769
    61327C18:2 ω6,9c/C18:0 ANTE4.517.724
    61327unknown 14.5030.514.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
61327-+++-+-----+--------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
61327-++++---+----

Isolation, sampling and environmental information

isolation

  • @ref: 61327
  • sample type: Human infection,71-yr-old man
  • sampling date: 2008-12-03
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Infection#Disease
#Infection#Patient

External links

@ref: 61327

culture collection no.: CCUG 57436

straininfo link

  • @ref: 108799
  • straininfo: 410818

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
61327Curators of the CCUGhttps://www.ccug.se/strain?id=57436Culture Collection University of Gothenburg (CCUG) (CCUG 57436)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
108799Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID410818.1