Strain identifier
version 9.1 (current version)
General
@ref: 61272
BacDive-ID: 155309
keywords: genome sequence, Bacteria, microaerophile
description: Moraxella catarrhalis CCUG 57283 is a microaerophile bacterium that was isolated from Human sputum,60-yr-old Male.
NCBI tax id
- NCBI tax id: 480
- Matching level: species
doi: 10.13145/bacdive155309.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Moraxella
- species: Moraxella catarrhalis
- full scientific name: Moraxella catarrhalis (Frosch and Kolle 1896) Henriksen and Bøvre 1968 (Approved Lists 1980)
synonyms
@ref synonym 20215 Branhamella catarrhalis 20215 Mikrokokkus catarrhalis
@ref: 61272
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Moraxella
species: Moraxella catarrhalis
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 97.5
Culture and growth conditions
culture temp
- @ref: 61272
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 61272
- oxygen tolerance: microaerophile
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | no | 98.833 |
| 69481 | no | 100 |
Isolation, sampling and environmental information
isolation
- @ref: 61272
- sample type: Human sputum,60-yr-old Male
- sampling date: 2008-11-03
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | #Male |
| #Host Body Product | #Fluids | #Sputum |
| #Infection | #Patient |
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Moraxella catarrhalis strain CCUG 57283 | 480.252 | wgs | patric | 480 |
| 66792 | Moraxella catarrhalis CCUG 57283 | 2902280220 | draft | img | 480 |
| 66792 | Moraxella catarrhalis CCUG 57283 | GCA_001679345 | scaffold | ncbi | 480 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 100 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 97.5 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 97.494 | yes |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 63.823 | yes |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 98.833 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 98.975 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 84.694 | no |
External links
@ref: 61272
culture collection no.: CCUG 57283
straininfo link
- @ref: 108765
- straininfo: 409177
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 61272 | Curators of the CCUG | https://www.ccug.se/strain?id=57283 | Culture Collection University of Gothenburg (CCUG) (CCUG 57283) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 108765 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID409177.1 |