Strain identifier

BacDive ID: 155205

Type strain: No

Species: Capnocytophaga sputigena

NCBI tax ID(s): 1019 (species)

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General

@ref: 61125

BacDive-ID: 155205

keywords: Bacteria, microaerophile, mesophilic

description: Capnocytophaga sputigena CCUG 56904 is a microaerophile, mesophilic bacterium that was isolated from Human blood,53-yr-old man.

NCBI tax id

  • NCBI tax id: 1019
  • Matching level: species

doi: 10.13145/bacdive155205.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga sputigena
  • full scientific name: Capnocytophaga sputigena Leadbetter et al. 1982

@ref: 61125

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga sputigena

type strain: no

Culture and growth conditions

culture temp

  • @ref: 61125
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 61125
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase+3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    61125C14:02.214
    61125C16:03.816
    61125C18:0218
    61125C13:0 iso1.212.612
    61125C15:0 ANTEISO1.614.711
    61125C15:0 ISO6214.621
    61125C15:0 ISO 3OH1.516.135
    61125C16:0 3OH4.317.52
    61125C17:0 iso 3OH9.818.161
    61125C18:1 ω9c317.769
    61125C18:2 ω6,9c/C18:0 ANTE4.117.724
    61125Unidentified0.812.947
    61125unknown 13.5662.713.566
    61125unknown 16.580116.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
61125-+---+++--++---+-+--

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
61125-++++---+++--

Isolation, sampling and environmental information

isolation

  • @ref: 61125
  • sample type: Human blood,53-yr-old man
  • sampling date: 2008-08-22
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 61125

culture collection no.: CCUG 56904

straininfo link

  • @ref: 108679
  • straininfo: 408594

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
61125Curators of the CCUGhttps://www.ccug.se/strain?id=56904Culture Collection University of Gothenburg (CCUG) (CCUG 56904)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
108679Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID408594.1