Strain identifier

BacDive ID: 15482

Type strain: Yes

Species: Streptomyces prasinosporus

Strain Designation: BD 278

Strain history: KCC S-0816 <-- IFO 13419 <-- SAJ <-- ISP 5506 <-- H. T. Tresner BD-278.

NCBI tax ID(s): 68256 (species)

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General

@ref: 9605

BacDive-ID: 15482

DSM-Number: 40506

keywords: 16S sequence, Bacteria

description: Streptomyces prasinosporus BD 278 is a bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 68256
  • Matching level: species

strain history

@refhistory
9605<- E.B. Shirling, ISP <- H.D. Tresner, Lederle Labs., BD 278
67770KCC S-0816 <-- IFO 13419 <-- SAJ <-- ISP 5506 <-- H. T. Tresner BD-278.

doi: 10.13145/bacdive15482.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces prasinosporus
  • full scientific name: Streptomyces prasinosporus Tresner et al. 1966 (Approved Lists 1980)

@ref: 9605

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces prasinosporus

full scientific name: Streptomyces prasinosporus Tresner et al. 1966

strain designation: BD 278

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 9605
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperature
18603positiveoptimum28
9605positivegrowth28
67770positivegrowth28

Physiology and metabolism

halophily

  • @ref: 18603
  • salt: NaCl
  • growth: positive
  • tested relation: maximum
  • concentration: 2.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
1860317234glucose+
1860322599arabinose+
1860317992sucrose-
1860318222xylose-
1860317268myo-inositol-
1860329864mannitol+
1860328757fructose-
1860326546rhamnose-
1860316634raffinose-
683685291gelatin+hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin-
6836835581indole-

enzymes

@refvalueactivityec
68368gelatinase+
68368tryptophan deaminase+4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase+3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGEL
18603+------+--+

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
9605soilIndiaINDAsia
67770SoilIndiaINDAsia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
186031German classification
96051Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces prasinosporus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4816D44383119nuccore68256
20218Streptomyces prasinosporus gene for 16S rRNA, partial sequence, strain: NBRC 13419AB1843901468nuccore68256
20218Streptomyces prasinosporus strain NRRL B-12431 16S ribosomal RNA gene, partial sequenceDQ0266551467nuccore68256

External links

@ref: 9605

culture collection no.: DSM 40506, ATCC 17918, CBS 720.72, IFO 13419, ISP 5506, NBRC 13419, RIA 1380, JCM 4816, BCRC 15177, CGMCC 4.1422, LMG 19346, NRRL B-12431, VKM Ac-979

straininfo link

  • @ref: 84569
  • straininfo: 13354

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9605Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40506)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40506
18603Wink, J.http://www.dsmz.de/microorganisms/wink_pdf/DSM40506.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68368Automatically annotated from API 20E
84569Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID13354.1StrainInfo: A central database for resolving microbial strain identifiers