Strain identifier
BacDive ID: 154616
Type strain: 
Species: Bradyrhizobium denitrificans
NCBI tax ID(s): 328552 (species)
version 8.1 (current version)
General
@ref: 60250
BacDive-ID: 154616
keywords: Bacteria, aerobe, mesophilic
description: Bradyrhizobium denitrificans CCUG 54588 is an aerobe, mesophilic bacterium that was isolated from Distilled water,industry.
NCBI tax id
- NCBI tax id: 328552
- Matching level: species
doi: 10.13145/bacdive154616.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Nitrobacteraceae
- genus: Bradyrhizobium
- species: Bradyrhizobium denitrificans
- full scientific name: Bradyrhizobium denitrificans (Hirsch and Müller 1986) van Berkum et al. 2011
synonyms
- @ref: 20215
- synonym: Blastobacter denitrificans
@ref: 60250
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Hyphomicrobiales
family: Bradyrhizobiaceae
genus: Bradyrhizobium
species: Bradyrhizobium denitrificans
type strain: no
Morphology
colony morphology
- @ref: 60250
- incubation period: 3 days
Culture and growth conditions
culture temp
- @ref: 60250
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 60250
- oxygen tolerance: aerobe
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | - | assimilation |
| 68369 | 17128 | adipate | - | assimilation |
| 68369 | 27689 | decanoate | - | assimilation |
| 68369 | 24265 | gluconate | - | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 17634 | D-glucose | - | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | + | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | + | 3.5.1.5 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 60250 C16:0 13.8 16 60250 C18:0 0.8 18 60250 11 methyl 18:1 ω7c 14.9 18.081 60250 C16:1 ω11c 0.9 15.757 60250 C18:1 ω7c /12t/9t 67.7 17.824 60250 C19:0 CYCLO ω8c 2 18.9 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60250 | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 60250
- sample type: Distilled water,industry
- sampling date: 2007-03-01
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Food production | #Beverage |
| #Engineered | #Industrial |
External links
@ref: 60250
culture collection no.: CCUG 54588
straininfo link
- @ref: 108221
- straininfo: 411433
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 60250 | Curators of the CCUG | https://www.ccug.se/strain?id=54588 | Culture Collection University of Gothenburg (CCUG) (CCUG 54588) | |
| 68369 | Automatically annotated from API 20NE | |||
| 108221 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID411433.1 |