Strain identifier

BacDive ID: 154599

Type strain: No

Species: Mycobacterium mucogenicum

NCBI tax ID(s): 56689 (species)

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General

@ref: 60224

BacDive-ID: 154599

keywords: Bacteria, microaerophile, mesophilic

description: Mycobacterium mucogenicum CCUG 54546 is a microaerophile, mesophilic bacterium that was isolated from Human blood,29-yr-old woman.

NCBI tax id

  • NCBI tax id: 56689
  • Matching level: species

doi: 10.13145/bacdive154599.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium mucogenicum
  • full scientific name: Mycobacterium mucogenicum Springer et al. 1995

  • synonyms

    • @ref: 20215
    • synonym: Mycolicibacterium mucogenicum

@ref: 60224

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium mucogenicum

type strain: no

Culture and growth conditions

culture temp

  • @ref: 60224
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 60224
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase-1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    60224C10:00.710
    60224C12:02.112
    60224C14:05.714
    60224C15:00.715
    60224C16:017.616
    60224C18:00.618
    60224C13:0 ISO 2OH0.713.814
    60224C14:0 ANTEISO0.513.707
    60224C16:0 anteiso0.615.717
    60224C16:1 ω7c6.315.819
    60224C16:1 ω7c/C15:0 ISO 2OH9.415.85
    60224C16:1 ω9c1.815.774
    60224C17:1 ω7c21.716.818
    60224C18:1 ω9c23.517.769
    60224C18:2 ω6,9c/C18:0 ANTE2.517.724
    60224C20:0 alcohol (C20:0 2OH alc)2.118.835
    60224Unidentified0.411.871
    60224Unidentified0.414.804
    60224unknown 11.7981.211.798
    60224unknown 13.7661.713.766
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
60224+--+----+------------

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
60224-+++-+----++----+---

Isolation, sampling and environmental information

isolation

  • @ref: 60224
  • sample type: Human blood,29-yr-old woman
  • sampling date: 2007-03-01
  • geographic location: Luleå
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 60224

culture collection no.: CCUG 54546

straininfo link

  • @ref: 108207
  • straininfo: 303112

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
60224Curators of the CCUGhttps://www.ccug.se/strain?id=54546Culture Collection University of Gothenburg (CCUG) (CCUG 54546)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
108207Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID303112.1