Strain identifier

BacDive ID: 154349

Type strain: No

Species: Cardiobacterium hominis

NCBI tax ID(s): 2718 (species)

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General

@ref: 59828

BacDive-ID: 154349

keywords: Bacteria, microaerophile, mesophilic

description: Cardiobacterium hominis CCUG 53200 is a microaerophile, mesophilic bacterium that was isolated from Human blood,11-yr-old female.

NCBI tax id

  • NCBI tax id: 2718
  • Matching level: species

doi: 10.13145/bacdive154349.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Cardiobacteriales
  • family: Cardiobacteriaceae
  • genus: Cardiobacterium
  • species: Cardiobacterium hominis
  • full scientific name: Cardiobacterium hominis Slotnick and Dougherty 1964 (Approved Lists 1980)

@ref: 59828

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Cardiobacteriales

family: Cardiobacteriaceae

genus: Cardiobacterium

species: Cardiobacterium hominis

type strain: no

Culture and growth conditions

culture temp

  • @ref: 59828
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 59828
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan+energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68377tryptophan deaminase+4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase-3.1.3.1
68377lipase+
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59828C12:0812
    59828C14:09.514
    59828C16:027.916
    59828C18:01.618
    59828C12:0 ALDE ?0.610.915
    59828C13:1 at 12-130.812.931
    59828C14:0 3OH/C16:1 ISO I2.915.485
    59828C16:0 3OH217.52
    59828C16:1 ω7c1.615.819
    59828C16:1 ω9c0.315.774
    59828C18:1 ω7c /12t/9t43.117.824
    59828C18:1 ω9c0.517.769
    59828C18:2 ω6,9c/C18:0 ANTE1.217.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
59828-+-+-+--+-++--------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
59828-++++--+---++

Isolation, sampling and environmental information

isolation

  • @ref: 59828
  • sample type: Human blood,11-yr-old female
  • sampling date: 2006-07-03
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Blood
#Infection#Patient
#Host#Human#Child

External links

@ref: 59828

culture collection no.: CCUG 53200

straininfo link

  • @ref: 108013
  • straininfo: 410216

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59828Curators of the CCUGhttps://www.ccug.se/strain?id=53200Culture Collection University of Gothenburg (CCUG) (CCUG 53200)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
108013Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID410216.1