Strain identifier
BacDive ID: 154127
Type strain:
Species: Bifidobacterium longum subsp. infantis
NCBI tax ID(s): 1682 (subspecies)
version 8.1 (current version)
General
@ref: 59565
BacDive-ID: 154127
keywords: Bacteria, anaerobe, mesophilic
description: Bifidobacterium longum subsp. infantis CCUG 52484 is an anaerobe, mesophilic bacterium that was isolated from Human feces,healthy elderly Italian individuals.
NCBI tax id
- NCBI tax id: 1682
- Matching level: subspecies
doi: 10.13145/bacdive154127.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium longum subsp. infantis
- full scientific name: Bifidobacterium longum subsp. infantis (Reuter 1963) Mattarelli et al. 2008
synonyms
- @ref: 20215
- synonym: Bifidobacterium infantis
@ref: 59565
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium longum subsp. infantis
type strain: no
Culture and growth conditions
culture temp
- @ref: 59565
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 59565
- oxygen tolerance: anaerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68370 | 28087 | glycogen | - | builds acid from |
68370 | 28017 | starch | + | builds acid from |
68370 | 16634 | raffinose | + | builds acid from |
68370 | 15443 | inulin | - | builds acid from |
68370 | 27082 | trehalose | - | builds acid from |
68370 | 17716 | lactose | + | builds acid from |
68370 | 17924 | D-sorbitol | - | builds acid from |
68370 | 16899 | D-mannitol | - | builds acid from |
68370 | 30849 | L-arabinose | + | builds acid from |
68370 | 16988 | D-ribose | - | builds acid from |
68370 | 29016 | arginine | - | hydrolysis |
68370 | 4853 | esculin | + | hydrolysis |
68370 | 606565 | hippurate | + | hydrolysis |
68371 | 17754 | glycerol | - | builds acid from |
68371 | 17113 | erythritol | - | builds acid from |
68371 | 17108 | D-arabinose | - | builds acid from |
68371 | 30849 | L-arabinose | + | builds acid from |
68371 | 16988 | D-ribose | - | builds acid from |
68371 | 65327 | D-xylose | + | builds acid from |
68371 | 65328 | L-xylose | - | builds acid from |
68371 | 15963 | ribitol | - | builds acid from |
68371 | 74863 | methyl beta-D-xylopyranoside | - | builds acid from |
68371 | 12936 | D-galactose | + | builds acid from |
68371 | 17634 | D-glucose | + | builds acid from |
68371 | 15824 | D-fructose | + | builds acid from |
68371 | 16024 | D-mannose | - | builds acid from |
68371 | 17266 | L-sorbose | - | builds acid from |
68371 | 62345 | L-rhamnose | - | builds acid from |
68371 | 16813 | galactitol | - | builds acid from |
68371 | 17268 | myo-inositol | - | builds acid from |
68371 | 16899 | D-mannitol | - | builds acid from |
68371 | 17924 | D-sorbitol | - | builds acid from |
68371 | 43943 | methyl alpha-D-mannoside | - | builds acid from |
68371 | 320061 | methyl alpha-D-glucopyranoside | - | builds acid from |
68371 | 59640 | N-acetylglucosamine | - | builds acid from |
68371 | 27613 | amygdalin | - | builds acid from |
68371 | 18305 | arbutin | - | builds acid from |
68371 | 4853 | esculin | + | builds acid from |
68371 | 17814 | salicin | - | builds acid from |
68371 | 17057 | cellobiose | - | builds acid from |
68371 | 17306 | maltose | + | builds acid from |
68371 | 17716 | lactose | + | builds acid from |
68371 | 28053 | melibiose | + | builds acid from |
68371 | 17992 | sucrose | + | builds acid from |
68371 | 27082 | trehalose | - | builds acid from |
68371 | 15443 | inulin | - | builds acid from |
68371 | 6731 | melezitose | - | builds acid from |
68371 | 16634 | raffinose | + | builds acid from |
68371 | 28017 | starch | - | builds acid from |
68371 | 28087 | glycogen | - | builds acid from |
68371 | 17151 | xylitol | - | builds acid from |
68371 | 28066 | gentiobiose | - | builds acid from |
68371 | 32528 | turanose | - | builds acid from |
68371 | 62318 | D-lyxose | - | builds acid from |
68371 | 16443 | D-tagatose | - | builds acid from |
68371 | 28847 | D-fucose | - | builds acid from |
68371 | 18287 | L-fucose | - | builds acid from |
68371 | 18333 | D-arabitol | - | builds acid from |
68371 | 18403 | L-arabitol | - | builds acid from |
68371 | 24265 | gluconate | - | builds acid from |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | Potassium 5-ketogluconate | - | builds acid from | |
68379 | 17632 | nitrate | - | reduction |
68379 | 4853 | esculin | + | hydrolysis |
68379 | 16199 | urea | - | hydrolysis |
68379 | 5291 | gelatin | - | hydrolysis |
68379 | 17634 | D-glucose | + | fermentation |
68379 | 16988 | D-ribose | - | fermentation |
68379 | 65327 | D-xylose | + | fermentation |
68379 | 16899 | D-mannitol | - | fermentation |
68379 | 17306 | maltose | + | fermentation |
68379 | 17716 | lactose | + | fermentation |
68379 | 17992 | sucrose | + | fermentation |
68379 | 28087 | glycogen | - | fermentation |
68380 | 16199 | urea | - | hydrolysis |
68380 | 29016 | arginine | - | hydrolysis |
68380 | 16024 | D-mannose | - | fermentation |
68380 | 16634 | raffinose | + | fermentation |
68380 | 29985 | L-glutamate | - | degradation |
68380 | 17632 | nitrate | - | reduction |
68380 | 27897 | tryptophan | - | energy source |
68381 | 29016 | arginine | - | hydrolysis |
68381 | 16988 | D-ribose | - | builds acid from |
68381 | 16899 | D-mannitol | - | builds acid from |
68381 | 30911 | sorbitol | - | builds acid from |
68381 | 17716 | lactose | + | builds acid from |
68381 | 27082 | trehalose | + | builds acid from |
68381 | 16634 | raffinose | + | builds acid from |
68381 | 17992 | sucrose | + | builds acid from |
68381 | 30849 | L-arabinose | + | builds acid from |
68381 | 18333 | D-arabitol | - | builds acid from |
68381 | 40585 | alpha-cyclodextrin | - | builds acid from |
68381 | 606565 | hippurate | - | hydrolysis |
68381 | 28087 | glycogen | - | builds acid from |
68381 | 27941 | pullulan | - | builds acid from |
68381 | 17306 | maltose | + | builds acid from |
68381 | 28053 | melibiose | + | builds acid from |
68381 | 6731 | melezitose | - | builds acid from |
68381 | 320055 | methyl beta-D-glucopyranoside | - | builds acid from |
68381 | 16443 | D-tagatose | - | builds acid from |
68381 | 16199 | urea | - | hydrolysis |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68370 | 15688 | acetoin | no |
68380 | 35581 | indole | no |
68381 | 15688 | acetoin | no |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test |
---|---|---|---|---|
68380 | 35581 | indole | - | |
68370 | 15688 | acetoin | - | |
68381 | 15688 | acetoin | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68381 | urease | - | 3.5.1.5 |
68381 | beta-mannosidase | - | 3.2.1.25 |
68381 | glycyl tryptophan arylamidase | - | |
68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68381 | beta-galactosidase | + | 3.2.1.23 |
68381 | Alanyl-Phenylalanyl-Proline arylamidase | + | |
68381 | alkaline phosphatase | - | 3.1.3.1 |
68381 | alpha-galactosidase | + | 3.2.1.22 |
68381 | beta-glucuronidase | - | 3.2.1.31 |
68381 | beta-glucosidase | - | 3.2.1.21 |
68381 | arginine dihydrolase | - | 3.5.3.6 |
68380 | serine arylamidase | - | |
68380 | glutamyl-glutamate arylamidase | - | |
68380 | histidine arylamidase | + | |
68380 | glycin arylamidase | + | |
68380 | alanine arylamidase | - | 3.4.11.2 |
68380 | tyrosine arylamidase | + | |
68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68380 | leucine arylamidase | + | 3.4.11.1 |
68380 | phenylalanine arylamidase | + | |
68380 | leucyl glycin arylamidase | - | 3.4.11.1 |
68380 | proline-arylamidase | + | 3.4.11.5 |
68380 | L-arginine arylamidase | + | |
68380 | alkaline phosphatase | - | 3.1.3.1 |
68380 | tryptophan deaminase | - | 4.1.99.1 |
68380 | alpha-fucosidase | - | 3.2.1.51 |
68380 | glutamate decarboxylase | - | 4.1.1.15 |
68380 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68380 | beta-glucuronidase | - | 3.2.1.31 |
68380 | alpha-arabinosidase | + | 3.2.1.55 |
68380 | beta-glucosidase | + | 3.2.1.21 |
68380 | alpha-glucosidase | + | 3.2.1.20 |
68380 | beta-Galactosidase 6-phosphate | - | |
68380 | beta-galactosidase | + | 3.2.1.23 |
68380 | alpha-galactosidase | + | 3.2.1.22 |
68380 | arginine dihydrolase | - | 3.5.3.6 |
68380 | urease | - | 3.5.1.5 |
68379 | catalase | - | 1.11.1.6 |
68379 | gelatinase | - | |
68379 | urease | - | 3.5.1.5 |
68379 | beta-glucosidase | + | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68379 | alpha-glucosidase | + | 3.2.1.20 |
68379 | beta-galactosidase | + | 3.2.1.23 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | - | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68379 | pyrazinamidase | + | 3.5.1.B15 |
68370 | arginine dihydrolase | - | 3.5.3.6 |
68370 | leucine arylamidase | + | 3.4.11.1 |
68370 | alkaline phosphatase | - | 3.1.3.1 |
68370 | beta-galactosidase | + | 3.2.1.23 |
68370 | beta-glucuronidase | - | 3.2.1.31 |
68370 | alpha-galactosidase | + | 3.2.1.22 |
68370 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68370 | beta-glucosidase | + | 3.2.1.21 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 59565 C12:0 0.8 12 59565 C14:0 6.7 14 59565 C16:0 30.4 16 59565 C18:0 11.5 18 59565 C13:0 3OH/C15:1 i I/H 4.4 14.469 59565 C13:1 at 12-13 1.2 12.931 59565 C17:0 iso 3OH 3 18.161 59565 C18:1 ω9c 10.4 17.769 59565 C18:1 ω9c DMA 20.5 18.226 59565 C18:2 ω6,9c/C18:0 ANTE 4.4 17.724 59565 C19:0 CYCLO ω9c 1.7 18.87 59565 unknown 16.754 3 16.754 59565 unknown 19.320 2.1 19.32 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
59565 | - | + | - | - | - | + | + | + | + | - | - | - | + | - | + | - | + | + | + | - | - |
API 20STR
@ref | VP | HIP | ESC | PYRA | alpha GAL | beta GUR | beta GAL | PAL | LAP | ADH | RIB | ARA | MAN | SOR | LAC | TRE | INU | RAF | AMD | GLYG | beta HEM |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
59565 | - | + | + | - | + | - | + | - | + | - | - | + | - | - | + | - | - | + | + | - | - |
API 50CHac
@ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
59565 | - | - | - | - | + | - | + | - | - | - | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | + | + | + | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
API rID32A
@ref | URE | ADH Arg | alpha GAL | beta GAL | beta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta NAG | MNE | RAF | GDC | alpha FUC | NIT | IND | PAL | ArgA | ProA | LGA | PheA | LeuA | PyrA | TyrA | AlaA | GlyA | HisA | GGA | SerA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
59565 | - | - | + | + | - | + | + | + | - | + | - | + | - | - | - | - | - | + | + | - | + | + | - | + | - | + | + | - | - |
API rID32STR
@ref | ADH Arg | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | CDEX | VP | APPA | beta GAL | PyrA | beta NAG | GTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Mbeta DG | TAG | beta MAN | URE |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
59565 | - | - | + | - | + | - | - | - | - | + | + | + | + | + | - | - | - | + | + | - | - | - | - | - | - | + | + | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 59565
- sample type: Human feces,healthy elderly Italian individuals
- geographic location: Camerino
- country: Italy
- origin.country: ITA
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
#Infection | #Patient |
External links
@ref: 59565
culture collection no.: CCUG 52484
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
59565 | Curators of the CCUG | https://www.ccug.se/strain?id=52484 | Culture Collection University of Gothenburg (CCUG) (CCUG 52484) | |
68370 | Automatically annotated from API 20STR | |||
68371 | Automatically annotated from API 50CH acid | |||
68379 | Automatically annotated from API Coryne | |||
68380 | Automatically annotated from API rID32A | |||
68381 | Automatically annotated from API rID32STR |