Strain identifier
version 9 (current version)
General
@ref: 59496
BacDive-ID: 154078
keywords: 16S sequence, Bacteria, aerobe
description: Mycobacterium iranicum CCUG 52297 is an aerobe bacterium that was isolated from Human sputum,26-yr-old woman.
NCBI tax id
- NCBI tax id: 912594
- Matching level: species
doi: 10.13145/bacdive154078.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Mycobacteriaceae
- genus: Mycobacterium
- species: Mycobacterium iranicum
- full scientific name: Mycobacterium iranicum Shojaei et al. 2013
synonyms
- @ref: 20215
- synonym: Mycolicibacterium iranicum
@ref: 59496
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Mycobacteriales
family: Mycobacteriaceae
genus: Mycobacterium
species: Mycobacterium iranicum
type strain: no
Culture and growth conditions
culture temp
- @ref: 59496
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 59496
- oxygen tolerance: aerobe
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 59496 C14:0 3.3 14 59496 C15:0 0.3 15 59496 C16:0 10.8 16 59496 C18:0 0.5 18 59496 C14:0 N alcohol 21.3 13.524 59496 C16:0 anteiso 0.5 15.717 59496 C16:1 ω7c 0.4 15.819 59496 C16:1 ω7c/C15:0 ISO 2OH 4.7 15.85 59496 C16:1 ω9c 0.3 15.774 59496 C17:1 ω7c 10.7 16.818 59496 C18:1 ω7c /12t/9t 0.6 17.824 59496 C18:1 ω9c 6.5 17.769 59496 C18:2 ω6,9c/C18:0 ANTE 5.9 17.724 59496 C20:0 alcohol (C20:0 2OH alc) 31.2 18.835 59496 TBSA 10Me18:0 1.6 18.392 59496 Unidentified 1.4 11.504 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 59496
- sample type: Human sputum,26-yr-old woman
- sampling date: 2005-11-28
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | #Female |
| #Host Body Product | #Fluids | #Sputum |
| #Infection | #Patient |
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 124043 | Mycobacterium iranicum strain CCUG 52297 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | DQ523525 | 445 | nuccore | 912594 |
| 124043 | Mycobacterium iranicum strain CCUG 52297 16S ribosomal RNA gene, partial sequence. | JQ886106 | 1485 | nuccore | 912594 |
External links
@ref: 59496
culture collection no.: CCUG 52297
straininfo link
- @ref: 107780
- straininfo: 293880
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 59496 | Curators of the CCUG | https://www.ccug.se/strain?id=52297 | Culture Collection University of Gothenburg (CCUG) (CCUG 52297) | |
| 107780 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID293880.1 | |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |