Strain identifier

BacDive ID: 154018

Type strain: No

Species: Cardiobacterium hominis

NCBI tax ID(s): 2718 (species)

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General

@ref: 59397

BacDive-ID: 154018

keywords: Bacteria, microaerophile

description: Cardiobacterium hominis CCUG 52008 is a microaerophile bacterium that was isolated from Human cerebrospinal fluid,31-yr-old man.

NCBI tax id

  • NCBI tax id: 2718
  • Matching level: species

doi: 10.13145/bacdive154018.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Cardiobacteriales
  • family: Cardiobacteriaceae
  • genus: Cardiobacterium
  • species: Cardiobacterium hominis
  • full scientific name: Cardiobacterium hominis Slotnick and Dougherty 1964 (Approved Lists 1980)

@ref: 59397

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Cardiobacteriales

family: Cardiobacteriaceae

genus: Cardiobacterium

species: Cardiobacterium hominis

type strain: no

Morphology

colony morphology

  • @ref: 59397
  • incubation period: 2 days

Culture and growth conditions

culture temp

  • @ref: 59397
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 59397
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan+energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68377tryptophan deaminase+4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59397C12:012.612
    59397C14:018.614
    59397C16:025.816
    59397C18:0118
    59397C14:0 3OH/C16:1 ISO I3.715.485
    59397C16:0 3OH1.317.52
    59397C16:1 ω7c3.115.819
    59397C16:1 ω9c0.415.774
    59397C18:1 ω7c /12t/9t31.617.824
    59397C18:1 ω9c0.417.769
    59397C18:2 ω6,9c/C18:0 ANTE1.517.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
59397-+---+----++--------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
59397-++++---+--++

Isolation, sampling and environmental information

isolation

  • @ref: 59397
  • sample type: Human cerebrospinal fluid,31-yr-old man
  • sampling date: 2005-11-01
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Cerebrospinal fluid
#Infection#Patient

External links

@ref: 59397

culture collection no.: CCUG 52008

straininfo link

  • @ref: 107733
  • straininfo: 409254

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59397Curators of the CCUGhttps://www.ccug.se/strain?id=52008Culture Collection University of Gothenburg (CCUG) (CCUG 52008)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
107733Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID409254.1