Strain identifier

BacDive ID: 153744

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

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General

@ref: 59015

BacDive-ID: 153744

keywords: Bacteria, microaerophile, mesophilic

description: Capnocytophaga canimorsus CCUG 50848 is a microaerophile, mesophilic bacterium that was isolated from Human blood,81-yr-old woman.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive153744.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 59015

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 59015
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 59015
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose-builds acid from
6837715824D-fructose-builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59015C14:00.714
    59015C16:03.116
    59015C18:02.118
    59015C13:0 iso0.712.612
    59015C13:1 at 12-132.312.931
    59015C15:0 ANTEISO2.814.711
    59015C15:0 ISO61.614.621
    59015C15:0 ISO 3OH1.716.135
    59015C16:0 iso0.415.626
    59015C16:1 ω7c0.415.819
    59015C17:0 iso0.216.629
    59015C18:1 ω9c2.817.769
    59015C18:2 ω6,9c/C18:0 ANTE4.517.724
    59015Unidentified0.413.232
    59015Unidentified0.417.156
    59015Unidentified0.617.545
    59015unknown 11.5411.311.541
    59015unknown 12.5550.212.555
    59015unknown 13.56613.413.566
    59015unknown 16.5800.316.58
    59015unknown 18.5550.218.555
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
59015-+++-++-+-++---+-+--

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
59015--------++---

Isolation, sampling and environmental information

isolation

  • @ref: 59015
  • sample type: Human blood,81-yr-old woman
  • sampling date: 2005-03-01
  • geographic location: Karlstad
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 59015

culture collection no.: CCUG 50848

straininfo link

  • @ref: 107501
  • straininfo: 303323

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59015Curators of the CCUGhttps://www.ccug.se/strain?id=50848Culture Collection University of Gothenburg (CCUG) (CCUG 50848)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
107501Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID303323.1