Strain identifier
version 8.1 (current version)
General
@ref: 59014
BacDive-ID: 153743
DSM-Number: 8443
keywords: genome sequence, Bacteria, aerobe, spore-forming, mesophilic, motile
description: Paenibacillus larvae CCUG 50846 is an aerobe, spore-forming, mesophilic bacterium that was isolated from Dead honeybee larvae .
NCBI tax id
- NCBI tax id: 1464
- Matching level: species
doi: 10.13145/bacdive153743.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus larvae
- full scientific name: Paenibacillus larvae (White 1906) Ash et al. 1994
synonyms
@ref synonym 20215 Bacillus larvae 20215 Paenibacillus pulvifaciens 20215 Bacillus pulvifaciens 20215 Paenibacillus larvae subsp. pulvifaciens
@ref: 59014
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus larvae
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | yes | 91.832 | |
| 69480 | 100 | positive |
Culture and growth conditions
culture temp
- @ref: 59014
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 59014
- oxygen tolerance: aerobe
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | yes | 100 |
| 69481 | yes | 100 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 59014 C14:0 2.5 14 59014 C15:0 5 15 59014 C16:0 9.2 16 59014 C15:0 ANTEISO 47.5 14.711 59014 C15:0 ISO 13.8 14.621 59014 C16:0 iso 5.6 15.626 59014 C16:1 ω3c 3.1 15.933 59014 C17:0 anteiso 9.9 16.722 59014 C17:0 iso 3.4 16.629 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 59014
- sample type: Dead honeybee larvae (Apis mellifera)
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Other | #Decomposing animal |
| #Host | #Arthropoda | #Insecta |
Sequence information
Genome sequences
- @ref: 66792
- description: Paenibacillus larvae subsp. larvae strain Eric_III
- accession: 147375.6
- assembly level: complete
- database: patric
- NCBI tax ID: 147375
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | yes | 100 | no |
| motile | yes | 82.512 | no |
| gram-positive | yes | 81.863 | no |
| anaerobic | no | 97.241 | yes |
| aerobic | yes | 89.035 | yes |
| halophile | no | 92.623 | no |
| spore-forming | yes | 96.993 | no |
| thermophile | no | 90.831 | no |
| glucose-util | yes | 88.234 | no |
| flagellated | yes | 61.998 | no |
| glucose-ferment | no | 86.028 | no |
External links
@ref: 59014
culture collection no.: CCUG 50846, NRRL NRS-1684, DSM 8443, LMG 16252
straininfo link
- @ref: 107500
- straininfo: 10704
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 59014 | Curators of the CCUG | https://www.ccug.se/strain?id=50846 | Culture Collection University of Gothenburg (CCUG) (CCUG 50846) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 107500 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID10704.1 |