Strain identifier

BacDive ID: 153256

Type strain: No

Species: Bacteroides xylanisolvens

NCBI tax ID(s): 371601 (species)

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General

@ref: 58391

BacDive-ID: 153256

keywords: Bacteria, anaerobe, mesophilic

description: Bacteroides xylanisolvens CCUG 48900 is an anaerobe, mesophilic bacterium that was isolated from Human pleural fluid.

NCBI tax id

  • NCBI tax id: 371601
  • Matching level: species

doi: 10.13145/bacdive153256.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Bacteroidaceae
  • genus: Bacteroides
  • species: Bacteroides xylanisolvens
  • full scientific name: Bacteroides xylanisolvens Chassard et al. 2008

@ref: 58391

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Bacteroidaceae

genus: Bacteroides

species: Bacteroides xylanisolvens

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58391
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 58391
  • oxygen tolerance: anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838016199urea-hydrolysis
6838029016arginine-hydrolysis
6838016024D-mannose+fermentation
6838016634raffinose+fermentation
6838029985L-glutamate+degradation
6838017632nitrate-reduction
6838027897tryptophan+energy source

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68380serine arylamidase-
68380glutamyl-glutamate arylamidase+
68380histidine arylamidase-
68380glycin arylamidase-
68380alanine arylamidase+3.4.11.2
68380tyrosine arylamidase-
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucine arylamidase-3.4.11.1
68380phenylalanine arylamidase-
68380leucyl glycin arylamidase+3.4.11.1
68380proline-arylamidase-3.4.11.5
68380L-arginine arylamidase-
68380alkaline phosphatase+3.1.3.1
68380tryptophan deaminase+4.1.99.1
68380alpha-fucosidase+3.2.1.51
68380glutamate decarboxylase+4.1.1.15
68380N-acetyl-beta-glucosaminidase+3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase+3.2.1.55
68380beta-glucosidase+3.2.1.21
68380alpha-glucosidase+3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase+3.2.1.23
68380alpha-galactosidase+3.2.1.22
68380arginine dihydrolase-3.5.3.6
68380urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase+3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58391C14:00.314
    58391C15:010.415
    58391C16:02.516
    58391C17:00.417
    58391C18:00.818
    58391C13:0 ANTEISO0.412.701
    58391C13:0 iso0.412.612
    58391C15:0 ANTEISO35.214.711
    58391C15:0 ISO10.814.621
    58391C16:0 iso0.815.626
    58391C16:1 ω7c0.315.819
    58391C17:0 anteiso0.616.722
    58391C17:0 iso0.416.629
    58391C17:0 iso 3OH17.918.161
    58391C17:1 ω9c ANTEISO2.216.525
    58391C18:1 ω9c2.217.769
    58391C18:2 ω6,9c/C18:0 ANTE4.417.724
    58391Unidentified113.655
    58391Unidentified1.717.548
    58391unknown 13.5667.513.566
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
58391-++-------++++-+++++

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
58391--++-+++-+++++-++--+----+--+-

Isolation, sampling and environmental information

isolation

  • @ref: 58391
  • sample type: Human pleural fluid
  • sampling date: 2003-05-20
  • geographic location: Marseille
  • country: France
  • origin.country: FRA
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Oral cavity and Airways#Pleural fluid
#Infection#Patient
#Host Body-Site#Oral cavity and airways

External links

@ref: 58391

culture collection no.: CCUG 48900

straininfo link

  • @ref: 107086
  • straininfo: 215084

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58391Curators of the CCUGhttps://www.ccug.se/strain?id=48900Culture Collection University of Gothenburg (CCUG) (CCUG 48900)
68380Automatically annotated from API rID32A
68382Automatically annotated from API zym
107086Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID215084.1