Strain identifier
BacDive ID: 15300
Type strain: 
Species: Streptomyces baldaccii
Strain history: KCC S-0272 <-- IPV 174.
NCBI tax ID(s): 66424 (species)
version 8.1 (current version)
General
@ref: 9844
BacDive-ID: 15300
DSM-Number: 40845
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Streptomyces baldaccii DSM 40845 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 66424
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9844 | <- KCC (Streptoverticillium baldacci) <- R. Locci, IPV 174 |
| 67770 | KCC S-0272 <-- IPV 174. |
doi: 10.13145/bacdive15300.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces baldaccii
- full scientific name: Streptomyces baldaccii corrig. (Farina and Locci 1966) Witt and Stackebrandt 1991
synonyms
@ref synonym 20215 Streptoverticillium baldaccii 20215 Streptomyces baldacii
@ref: 9844
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces hiroshimensis
full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9844 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9844 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 9844 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-9(H8)
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 9844 | soil | ||||
| 67770 | Soil | Arcinazzo | Italy | ITA | Europe |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 9844
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces hiroshimensis gene for 16S rRNA, partial sequence, strain: NBRC 14693 | AB249979 | 1457 | ena | 66424 |
| 67770 | Streptomyces roseoverticillatus strain NRRL B-3500 16S ribosomal RNA gene, partial sequence | EF178689 | 1435 | ena | 66429 |
| 67770 | Streptoverticillium baldacii partial 16S rRNA | X53164 | 1349 | ena | 66429 |
Genome sequences
- @ref: 67770
- description: Streptomyces roseoverticillatus NRRL B-3500
- accession: GCA_000719265
- assembly level: contig
- database: ncbi
- NCBI tax ID: 66429
GC content
- @ref: 67770
- GC-content: 72.4
- method: genome sequence analysis
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 93.102 | no |
| flagellated | no | 98.276 | no |
| gram-positive | yes | 90.568 | no |
| anaerobic | no | 99.362 | no |
| halophile | no | 93.814 | no |
| spore-forming | yes | 94.264 | no |
| thermophile | no | 97.39 | yes |
| glucose-util | yes | 91.528 | no |
| aerobic | yes | 92.415 | no |
| glucose-ferment | no | 90.02 | no |
External links
@ref: 9844
culture collection no.: DSM 40845, ATCC 23654, IAM 14293, IFO 14693, JCM 4272, KCC S-0272, NBRC 14693, IPV 174, BCRC 12452, CECT 3255, HUT 6222, IFO 16204, IMSNU 21312, IMSNU 21330, KACC 20026, KCTC 9081, KCTC 9131, NBRC 16204, NCB 819, NRRL B-3500, PCM 2350, VKM Ac-821
straininfo link
- @ref: 84394
- straininfo: 38151
literature
- Pubmed-ID: 10395983
- title: Anionic carbohydrate-containing polymers of cell walls in two streptoverticille genospecies.
- authors: Kozlova YI, Streshinskaya GM, Shashkov AS, Evtushenko LI, Naumova IB
- journal: Biochemistry (Mosc)
- DOI: BCM64060805
- year: 1999
- mesh: Carbohydrates/*chemistry, Cell Wall/*chemistry, Magnetic Resonance Spectroscopy, Polymers/*chemistry, Streptomyces/*chemistry
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9844 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40845) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40845 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 84394 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID38151.1 | StrainInfo: A central database for resolving microbial strain identifiers |