Strain identifier

BacDive ID: 15300

Type strain: No

Species: Streptomyces baldaccii

Strain history: KCC S-0272 <-- IPV 174.

NCBI tax ID(s): 66424 (species)

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General

@ref: 9844

BacDive-ID: 15300

DSM-Number: 40845

keywords: genome sequence, 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, Gram-positive

description: Streptomyces baldaccii DSM 40845 is an aerobe, spore-forming, mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 66424
  • Matching level: species

strain history

@refhistory
9844<- KCC (Streptoverticillium baldacci) <- R. Locci, IPV 174
67770KCC S-0272 <-- IPV 174.

doi: 10.13145/bacdive15300.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces baldaccii
  • full scientific name: Streptomyces baldaccii corrig. (Farina and Locci 1966) Witt and Stackebrandt 1991
  • synonyms

    @refsynonym
    20215Streptoverticillium baldaccii
    20215Streptomyces baldacii

@ref: 9844

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces hiroshimensis

full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: positive
  • confidence: 90.017

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9844GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9844STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf

culture temp

@refgrowthtypetemperature
9844positivegrowth28
67770positivegrowth28

Physiology and metabolism

oxygen tolerance

  • @ref: 69480
  • oxygen tolerance: aerobe
  • confidence: 92.793

spore formation

  • @ref: 69480
  • spore formation: yes
  • confidence: 92.703

observation

  • @ref: 67770
  • observation: quinones: MK-9(H8)

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
9844soil
67770SoilArcinazzoItalyITAEurope

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 9844
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces hiroshimensis gene for 16S rRNA, partial sequence, strain: NBRC 14693AB2499791457nuccore66424
67770Streptomyces roseoverticillatus strain NRRL B-3500 16S ribosomal RNA gene, partial sequenceEF1786891435nuccore66429
67770Streptoverticillium baldacii partial 16S rRNAX531641349nuccore66429

Genome sequences

  • @ref: 67770
  • description: Streptomyces roseoverticillatus NRRL B-3500
  • accession: GCA_000719265
  • assembly level: contig
  • database: ncbi
  • NCBI tax ID: 66429

GC content

  • @ref: 67770
  • GC-content: 72.4
  • method: genome sequence analysis

Genome-based predictions

predictions

@reftraitmodeldescriptionpredictionconfidencetraining_data
69480gram-positivegram-positivePositive reaction to Gram-stainingyes90.017no
69480anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no98.344no
69480aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)yes92.793no
69480spore-formingspore-formingAbility to form endo- or exosporesyes92.703no
69480thermophilicthermophileAbility to grow at temperatures above or equal to 45°Cno97no
69480flagellatedmotile2+Ability to perform flagellated movementno89no

External links

@ref: 9844

culture collection no.: DSM 40845, ATCC 23654, IAM 14293, IFO 14693, JCM 4272, KCC S-0272, NBRC 14693, IPV 174, BCRC 12452, CECT 3255, HUT 6222, IFO 16204, IMSNU 21312, IMSNU 21330, KACC 20026, KCTC 9081, KCTC 9131, NBRC 16204, NCB 819, NRRL B-3500, PCM 2350, VKM Ac-821

straininfo link

  • @ref: 84394
  • straininfo: 38151

literature

  • Pubmed-ID: 10395983
  • title: Anionic carbohydrate-containing polymers of cell walls in two streptoverticille genospecies.
  • authors: Kozlova YI, Streshinskaya GM, Shashkov AS, Evtushenko LI, Naumova IB
  • journal: Biochemistry (Mosc)
  • DOI: BCM64060805
  • year: 1999
  • mesh: Carbohydrates/*chemistry, Cell Wall/*chemistry, Magnetic Resonance Spectroscopy, Polymers/*chemistry, Streptomyces/*chemistry

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9844Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40845)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40845
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
84394Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID38151.1StrainInfo: A central database for resolving microbial strain identifiers