Strain identifier

BacDive ID: 152803

Type strain: No

Species: Actinobacillus pleuropneumoniae

NCBI tax ID(s): 715 (species)

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General

@ref: 57803

BacDive-ID: 152803

keywords: genome sequence, Bacteria, Gram-negative

description: Actinobacillus pleuropneumoniae CCUG 47657 is a Gram-negative bacterium that was isolated from Porcine pleuropneumonia.

NCBI tax id

  • NCBI tax id: 715
  • Matching level: species

doi: 10.13145/bacdive152803.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Actinobacillus
  • species: Actinobacillus pleuropneumoniae
  • full scientific name: Actinobacillus pleuropneumoniae (Shope 1964) Pohl et al. 1983

  • synonyms

    @refsynonym
    20215Haemophilus pleuropneumoniae
    20215Hemophilus pleuropneumoniae

@ref: 57803

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Actinobacillus

species: Actinobacillus pleuropneumoniae

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 99.975

Physiology and metabolism

spore formation

@refspore formationconfidence
69480no99.99
69481no100

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea+hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease+3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57803C12:00.612
    57803C14:022.214
    57803C16:028.716
    57803C18:01.118
    57803C13:0 ISO 2OH0.713.814
    57803C14:0 3OH/C16:1 ISO I915.485
    57803C16:1 ω7c33.215.819
    57803C16:1 ω9c0.215.774
    57803C18:1 ω9c1.617.769
    57803C18:2 ω6,9c/C18:0 ANTE2.217.724
    57803unknown 14.5030.514.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57803-+--------+---------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
57803-++++-+-++---

Isolation, sampling and environmental information

isolation

  • @ref: 57803
  • sample type: Porcine pleuropneumonia
  • sampling date: 1973
  • country: Denmark
  • origin.country: DNK
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Suidae (Pig,Swine)
#Infection#Disease

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Actinobacillus pleuropneumoniae NCTC10976GCA_900638445completencbi715
66792Actinobacillus pleuropneumoniae strain NCTC10976715.83completepatric715
66792Actinobacillus pleuropneumoniae NCTC109762847073808completeimg715

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
flagellatedno94.484no
gram-positiveno98.165no
anaerobicno98.173no
aerobicno89.153no
halophileno60.181no
spore-formingno98.848no
thermophileno98.033no
glucose-utilno52.993no
motileno91.029no
glucose-fermentno52.58no

External links

@ref: 57803

culture collection no.: CCUG 47657, NCTC 10976

straininfo link

  • @ref: 106708
  • straininfo: 111131

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57803Curators of the CCUGhttps://www.ccug.se/strain?id=47657Culture Collection University of Gothenburg (CCUG) (CCUG 47657)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68377Automatically annotated from API NH
68382Automatically annotated from API zym
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
106708Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID111131.1