Strain identifier
BacDive ID: 152802
Type strain: 
Species: Actinobacillus pleuropneumoniae
NCBI tax ID(s): 715 (species)
version 9.1 (current version)
General
@ref: 57802
BacDive-ID: 152802
keywords: genome sequence, Bacteria
description: Actinobacillus pleuropneumoniae CCUG 47656 is a bacterium that was isolated from Porcine.
NCBI tax id
- NCBI tax id: 715
- Matching level: species
doi: 10.13145/bacdive152802.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Actinobacillus
- species: Actinobacillus pleuropneumoniae
- full scientific name: Actinobacillus pleuropneumoniae (Shope 1964) Pohl et al. 1983
synonyms
@ref synonym 20215 Haemophilus pleuropneumoniae 20215 Hemophilus pleuropneumoniae
@ref: 57802
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Actinobacillus
species: Actinobacillus pleuropneumoniae
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 92.321 | |
| 69480 | 97.5 | negative |
Isolation, sampling and environmental information
isolation
- @ref: 57802
- sample type: Porcine
- geographic location: Femoe
- country: Denmark
- origin.country: DNK
- continent: Europe
isolation source categories
- Cat1: #Host
- Cat2: #Mammals
- Cat3: #Suidae (Pig,Swine)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Actinobacillus pleuropneumoniae NCTC11407 | GCA_900444975 | contig | ncbi | 715 |
| 66792 | Actinobacillus pleuropneumoniae strain NCTC11407 | 715.81 | wgs | patric | 715 |
| 66792 | Actinobacillus pleuropneumoniae NCTC 11407 | 2839001266 | draft | img | 715 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 86 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 97.5 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 94.645 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 89.408 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 78.059 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 97.5 | no |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 92.321 | no |
External links
@ref: 57802
culture collection no.: CCUG 47656, NCTC 11407
straininfo link
- @ref: 106707
- straininfo: 111130
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 57802 | Curators of the CCUG | https://www.ccug.se/strain?id=47656 | Culture Collection University of Gothenburg (CCUG) (CCUG 47656) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 106707 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID111130.1 |