Strain identifier

BacDive ID: 152500

Type strain: No

Species: Corynebacterium amycolatum

NCBI tax ID(s): 43765 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9 (current version):
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 9 (current version)

General

@ref: 57417

BacDive-ID: 152500

keywords: 16S sequence, Bacteria, microaerophile

description: Corynebacterium amycolatum CCUG 46945 is a microaerophile bacterium that was isolated from Human.

NCBI tax id

  • NCBI tax id: 43765
  • Matching level: species

doi: 10.13145/bacdive152500.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Corynebacteriaceae
  • genus: Corynebacterium
  • species: Corynebacterium amycolatum
  • full scientific name: Corynebacterium amycolatum Collins et al. 1988

@ref: 57417

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Corynebacteriaceae

genus: Corynebacterium

species: Corynebacterium amycolatum

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57417
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 57417
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose+fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose+fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57417C14:0114
    57417C15:00.615
    57417C16:031.716
    57417C17:02.417
    57417C18:014.318
    57417C16:1 ω7c1.315.819
    57417C16:1 ω9c0.815.774
    57417C17:1 ω8c1.316.792
    57417C18:1 ω9c33.117.769
    57417C18:2 ω6,9c/C18:0 ANTE11.617.724
    57417C20:4 ω6,9,12,15c0.519.395
    57417Unidentified0.415.938
    57417Unidentified119.975
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
57417-+-+---------+--+---+

Isolation, sampling and environmental information

isolation

  • @ref: 57417
  • sample type: Human
  • sampling date: 2002
  • geographic location: Kristiansand
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

  • Cat1: #Host
  • Cat2: #Human

Sequence information

16S sequences

  • @ref: 124043
  • description: Corynebacterium amycolatum partial 16S rRNA gene, culture collection CCUG:46945
  • accession: FN668740
  • length: 1349
  • database: nuccore
  • NCBI tax ID: 43765

External links

@ref: 57417

culture collection no.: CCUG 46945

straininfo link

  • @ref: 106456
  • straininfo: 110849

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57417Curators of the CCUGhttps://www.ccug.se/strain?id=46945Culture Collection University of Gothenburg (CCUG) (CCUG 46945)
68379Automatically annotated from API Coryne
106456Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID110849.1
124043Dr. Isabel Schober, Dr. Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy