Strain identifier

BacDive ID: 152430

Type strain: No

Species: Histophilus somni

NCBI tax ID(s): 731 (species)

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General

@ref: 57337

BacDive-ID: 152430

keywords: Bacteria, microaerophile, mesophilic

description: Histophilus somni CCUG 46770 is a microaerophile, mesophilic bacterium that was isolated from Bovine lung,diseased animal.

NCBI tax id

  • NCBI tax id: 731
  • Matching level: species

doi: 10.13145/bacdive152430.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Histophilus
  • species: Histophilus somni
  • full scientific name: Histophilus somni Angen et al. 2003

@ref: 57337

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Histophilus

species: Histophilus somni

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57337
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57337
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine+degradation
6837716199urea-hydrolysis
6837727897tryptophan+energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68377tryptophan deaminase+4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase-3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase+4.1.1.17
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase+3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57337C12:03.712
    57337C14:08.114
    57337C16:03316
    57337C18:01.518
    57337C13:0 ISO 2OH0.313.814
    57337C14:0 3OH/C16:1 ISO I6.215.485
    57337C16:1 ω5c0.315.908
    57337C16:1 ω7c37.415.819
    57337C18:1 ω7c /12t/9t4.817.824
    57337C18:1 ω9c1.217.769
    57337C18:2 ω6,9c/C18:0 ANTE2.117.724
    57337Unidentified0.510.914
    57337Unidentified0.215.175
    57337unknown 14.5030.614.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57337-----+----++--+-----

API NH

@refGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
57337+++++------+

Isolation, sampling and environmental information

isolation

  • @ref: 57337
  • sample type: Bovine lung,diseased animal
  • country: Australia
  • origin.country: AUS
  • continent: Australia and Oceania

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body-Site#Oral cavity and airways#Lung
#Infection#Disease

External links

@ref: 57337

culture collection no.: CCUG 46770, MCCM 03030

straininfo link

  • @ref: 106396
  • straininfo: 97628

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57337Curators of the CCUGhttps://www.ccug.se/strain?id=46770Culture Collection University of Gothenburg (CCUG) (CCUG 46770)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
106396Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID97628.1