Strain identifier

BacDive ID: 152393

Type strain: No

Species: Dysgonomonas capnocytophagoides

NCBI tax ID(s): 45254 (species)

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General

@ref: 57297

BacDive-ID: 152393

keywords: Bacteria, aerobe, mesophilic

description: Dysgonomonas capnocytophagoides CCUG 46664 is an aerobe, mesophilic bacterium that was isolated from Human blood,leukaemia,acute myeloid.

NCBI tax id

  • NCBI tax id: 45254
  • Matching level: species

doi: 10.13145/bacdive152393.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Dysgonomonadaceae
  • genus: Dysgonomonas
  • species: Dysgonomonas capnocytophagoides
  • full scientific name: Dysgonomonas capnocytophagoides Hofstad et al. 2000

@ref: 57297

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Dysgonomonadaceae

genus: Dysgonomonas

species: Dysgonomonas capnocytophagoides

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57297
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57297
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57297C13:00.813
    57297C14:01.314
    57297C15:01615
    57297C16:03.116
    57297C12:0 ISO0.511.608
    57297C12:1 at 11-12111.925
    57297C13:0 ANTEISO1.212.701
    57297C13:1 at 12-131.212.931
    57297C14:0 ISO1213.618
    57297C15:0 3OH316.504
    57297C15:0 ANTEISO23.314.711
    57297C15:0 ISO2.114.621
    57297C15:1 ω6c3.614.856
    57297C16:0 3OH3.417.52
    57297C16:0 iso0.315.626
    57297C16:0 iso 3OH817.145
    57297C16:1 ISO H1.115.461
    57297C16:1 ω7c3.415.819
    57297C17:0 2OH1.318.249
    57297C17:0 3OH1.518.535
    57297C17:0 iso 3OH2.518.161
    57297C17:1 ω6c0.616.862
    57297C17:1 ω8c0.816.792
    57297C18:1 ω9c1.517.769
    57297C18:2 ω6,9c/C18:0 ANTE2.617.724
    57297Unidentified3.4
    57297Unidentified0.6
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57297-++-------++++-++---

API NH

@refGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
57297++++---++-+-

Isolation, sampling and environmental information

isolation

  • @ref: 57297
  • sample type: Human blood,leukaemia,acute myeloid
  • sampling date: 1998
  • geographic location: Zürich
  • country: Switzerland
  • origin.country: CHE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 57297

culture collection no.: CCUG 46664

straininfo link

  • @ref: 106364
  • straininfo: 110756

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57297Curators of the CCUGhttps://www.ccug.se/strain?id=46664Culture Collection University of Gothenburg (CCUG) (CCUG 46664)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68377Automatically annotated from API NH
68382Automatically annotated from API zym
106364Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID110756.1