Strain identifier

BacDive ID: 151959

Type strain: No

Species: Clostridioides difficile

NCBI tax ID(s): 1496 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 56740

BacDive-ID: 151959

keywords: Bacteria

description: Clostridioides difficile CCUG 45345 is a bacterium that was isolated from Human feces,65-yr-old woman.

NCBI tax id

  • NCBI tax id: 1496
  • Matching level: species

doi: 10.13145/bacdive151959.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Peptostreptococcaceae
  • genus: Clostridioides
  • species: Clostridioides difficile
  • full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016
  • synonyms

    @refsynonym
    20215Bacillus difficilis
    20215Peptoclostridium difficile
    20215Clostridium difficile

@ref: 56740

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Eubacteriales

family: Peptostreptococcaceae

genus: Clostridioides

species: Clostridioides difficile

type strain: no

Physiology and metabolism

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56740C10:01.610
    56740C12:03.712
    56740C14:03.114
    56740C16:01516
    56740C18:07.518
    56740C16:0 aldehyde4.914.949
    56740C16:0 iso1.615.626
    56740C16:1 ω7c8.215.819
    56740C16:1 ω9c5.315.774
    56740C17:0 CYCLO4.316.888
    56740C17:1 ISO I/C16:0 DMA16.716.481
    56740C18:1 ω7c /12t/9t3.317.824
    56740C18:1 ω9c6.817.769
    56740C18:2 ω6,9c/C18:0 ANTE2.817.724
    56740C19:0 CYCLO ω9c5.718.87
    56740C19:1 ISO I6.718.473
    56740unknown 9.7303.29.73
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

Isolation, sampling and environmental information

isolation

  • @ref: 56740
  • sample type: Human feces,65-yr-old woman
  • sampling date: 2001-04-22
  • geographic location: Linköping
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Gastrointestinal tract#Feces (Stool)
#Infection#Patient

External links

@ref: 56740

culture collection no.: CCUG 45345

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56740Curators of the CCUGhttps://www.ccug.se/strain?id=45345Culture Collection University of Gothenburg (CCUG) (CCUG 45345)