Strain identifier

BacDive ID: 151796

Type strain: No

Species: Tsukamurella pulmonis

NCBI tax ID(s): 47312 (species)

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General

@ref: 56540

BacDive-ID: 151796

keywords: Bacteria

description: Tsukamurella pulmonis CCUG 44913 is a bacterium that was isolated from Human wound on back,86-yr-old woman.

NCBI tax id

  • NCBI tax id: 47312
  • Matching level: species

doi: 10.13145/bacdive151796.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Tsukamurellaceae
  • genus: Tsukamurella
  • species: Tsukamurella pulmonis
  • full scientific name: Tsukamurella pulmonis Yassin et al. 1996

  • synonyms

    • @ref: 20215
    • synonym: Tsukamurella spongiae

@ref: 56540

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Tsukamurellaceae

genus: Tsukamurella

species: Tsukamurella pulmonis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56540C12:00.812
    56540C14:03.514
    56540C16:014.716
    56540C17:00.317
    56540C18:00.918
    56540C16:0 anteiso0.415.717
    56540C16:1 ω11c0.815.757
    56540C16:1 ω7c0.515.819
    56540C16:1 ω7c/C15:0 ISO 2OH14.915.85
    56540C18:1 ω9c30.217.769
    56540C18:2 ω6,9c/C18:0 ANTE3.317.724
    56540C20:1 ω9c2.719.77
    56540TBSA 10Me18:01.318.392
    56540Unidentified114.278
    56540Unidentified3.416.164
    56540Unidentified5.816.298
    56540Unidentified12.318.105
    56540Unidentified1.818.713
    56540unknown 13.9610.913.961
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
56540-+-+--+-+-----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
56540-+++-+----++---++-+-

Isolation, sampling and environmental information

isolation

  • @ref: 56540
  • sample type: Human wound on back,86-yr-old woman
  • sampling date: 2001-02-13
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 56540

culture collection no.: CCUG 44913

straininfo link

  • @ref: 105860
  • straininfo: 110196

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56540Curators of the CCUGhttps://www.ccug.se/strain?id=44913Culture Collection University of Gothenburg (CCUG) (CCUG 44913)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
105860Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID110196.1