Strain identifier

BacDive ID: 151791

Type strain: No

Species: Staphylococcus epidermidis

NCBI tax ID(s): 1282 (species)

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General

@ref: 56526

BacDive-ID: 151791

keywords: Bacteria

description: Staphylococcus epidermidis CCUG 44887 is a bacterium that was isolated from Human wound.

NCBI tax id

  • NCBI tax id: 1282
  • Matching level: species

doi: 10.13145/bacdive151791.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus epidermidis
  • full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Albococcus epidermidis

@ref: 56526

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus epidermidis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837516199urea+hydrolysis
6837529016arginine-hydrolysis
6837518257ornithine+degradation
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose-fermentation
6837517306maltose-fermentation
6837517716lactose+fermentation
6837527082trehalose-fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837559640N-acetylglucosamine-fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is sensitive: yes
  • sensitivity conc.: 1.8 µg

metabolite production

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase+4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease+3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56526C14:00.314
    56526C16:01.316
    56526C18:06.618
    56526C19:00.519
    56526C20:03.520
    56526C14:0 ISO1.313.618
    56526C15:0 ANTEISO34.114.711
    56526C15:0 ISO6.614.621
    56526C16:0 iso1.515.626
    56526C17:0 anteiso13.316.722
    56526C17:0 iso6.716.629
    56526C18:0 ISO1.317.632
    56526C18:1 ω9c0.717.769
    56526C18:2 ω6,9c/C18:0 ANTE2.117.724
    56526C19:0 ANTEISO4.718.729
    56526C19:0 ISO3.818.633
    56526C20:0 ISO0.219.635
    56526C20:2 ω6,9c1.219.735
    56526Unidentified114.929
    56526Unidentified5.515.028
    56526Unidentified1.517.029
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
56526+-+-++--+-----++--+--+----

Isolation, sampling and environmental information

isolation

  • @ref: 56526
  • sample type: Human wound
  • sampling date: 2001-02-07
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Other#Wound

External links

@ref: 56526

culture collection no.: CCUG 44887

straininfo link

  • @ref: 105855
  • straininfo: 110190

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56526Curators of the CCUGhttps://www.ccug.se/strain?id=44887Culture Collection University of Gothenburg (CCUG) (CCUG 44887)
68375Automatically annotated from API ID32STA
105855Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID110190.1