Strain identifier
version 8.1 (current version)
General
@ref: 56372
BacDive-ID: 151655
keywords: Bacteria
description: Bifidobacterium dentium CCUG 44545 is a bacterium that was isolated from Human blood.
NCBI tax id
- NCBI tax id: 1689
- Matching level: species
doi: 10.13145/bacdive151655.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium dentium
- full scientific name: Bifidobacterium dentium Scardovi and Crociani 1974 (Approved Lists 1980)
@ref: 56372
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium dentium
type strain: no
Physiology and metabolism
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68380 | 16199 | urea | - | hydrolysis |
68380 | 29016 | arginine | - | hydrolysis |
68380 | 16024 | D-mannose | + | fermentation |
68380 | 16634 | raffinose | + | fermentation |
68380 | 29985 | L-glutamate | - | degradation |
68380 | 17632 | nitrate | - | reduction |
68380 | 27897 | tryptophan | - | energy source |
metabolite production
- @ref: 68380
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68380
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68380 | serine arylamidase | - | |
68380 | glutamyl-glutamate arylamidase | - | |
68380 | histidine arylamidase | - | |
68380 | glycin arylamidase | - | |
68380 | alanine arylamidase | - | 3.4.11.2 |
68380 | tyrosine arylamidase | - | |
68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68380 | leucine arylamidase | - | 3.4.11.1 |
68380 | phenylalanine arylamidase | + | |
68380 | leucyl glycin arylamidase | - | 3.4.11.1 |
68380 | proline-arylamidase | + | 3.4.11.5 |
68380 | L-arginine arylamidase | - | |
68380 | alkaline phosphatase | - | 3.1.3.1 |
68380 | tryptophan deaminase | - | 4.1.99.1 |
68380 | alpha-fucosidase | - | 3.2.1.51 |
68380 | glutamate decarboxylase | - | 4.1.1.15 |
68380 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68380 | beta-glucuronidase | - | 3.2.1.31 |
68380 | alpha-arabinosidase | + | 3.2.1.55 |
68380 | beta-glucosidase | + | 3.2.1.21 |
68380 | alpha-glucosidase | + | 3.2.1.20 |
68380 | beta-Galactosidase 6-phosphate | - | |
68380 | beta-galactosidase | + | 3.2.1.23 |
68380 | alpha-galactosidase | + | 3.2.1.22 |
68380 | arginine dihydrolase | - | 3.5.3.6 |
68380 | urease | - | 3.5.1.5 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 56372 C10:0 0.2 10 56372 C12:0 1.3 12 56372 C14:0 6.2 14 56372 C16:0 25.7 16 56372 C18:0 10.4 18 56372 C13:0 3OH/C15:1 i I/H 1.8 14.469 56372 C13:1 at 12-13 0.4 12.931 56372 C16:1 ω11c 1.4 15.757 56372 C17:0 anteiso 4.2 16.722 56372 C17:0 iso 3OH 3.8 18.161 56372 C17:1 ω5c ISO 0.8 16.461 56372 C18:1 ω7c /12t/9t 0.9 17.824 56372 C18:1 ω9c 11.7 17.769 56372 C18:1 ω9c DMA 16 18.226 56372 C19:0 ISO 1.9 18.633 56372 Unidentified 0.5 12.26 56372 Unidentified 0.4 12.671 56372 Unidentified 0.9 14.276 56372 Unidentified 3.4 16.292 56372 Unidentified 0.6 16.699 56372 Unidentified 0.4 18.049 56372 Unidentified 1.1 18.093 56372 Unidentified 3 18.306 56372 unknown 16.754 2.4 16.754 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API rID32A
@ref | URE | ADH Arg | alpha GAL | beta GAL | beta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta NAG | MNE | RAF | GDC | alpha FUC | NIT | IND | PAL | ArgA | ProA | LGA | PheA | LeuA | PyrA | TyrA | AlaA | GlyA | HisA | GGA | SerA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
56372 | - | - | + | + | - | + | + | + | - | - | + | + | - | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 56372
- sample type: Human blood
- sampling date: 2000-10-01
- geographic location: Gävle
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body Product | #Fluids | #Blood |
External links
@ref: 56372
culture collection no.: CCUG 44545
straininfo link
- @ref: 105742
- straininfo: 110050
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
56372 | Curators of the CCUG | https://www.ccug.se/strain?id=44545 | Culture Collection University of Gothenburg (CCUG) (CCUG 44545) | |
68380 | Automatically annotated from API rID32A | |||
105742 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID110050.1 |