Strain identifier
BacDive ID: 15164
Type strain: 
Species: Streptomyces flavovirens
Strain history: KCC S-0223 <-- J. Nüesch <-- ETH 24303.
NCBI tax ID(s): 52258 (species)
General
@ref: 9269
BacDive-ID: 15164
DSM-Number: 40071
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces flavovirens DSM 40071 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 52258
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9269 | <- E.B. Shirling, ISP <- S.A. Waksman, IMRU |
| 67770 | KCC S-0223 <-- J. Nüesch <-- ETH 24303. |
doi: 10.13145/bacdive15164.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces flavovirens
- full scientific name: Streptomyces flavovirens (Waksman 1923) Waksman and Henrici 1948 (Approved Lists 1980)
synonyms
@ref synonym 20215 Actinomyces flavogriseus 20215 Actinomyces flavovirens 20215 Streptomyces nigrifaciens 20215 Streptomyces flavogriseus
@ref: 9269
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces flavovirens
full scientific name: Streptomyces flavovirens (Waksman 1923) Waksman and Henrici 1948 emend. Lanoot et al. 2005
type strain: no
Culture and growth conditions
culture medium
- @ref: 9269
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 9269 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Isolation, sampling and environmental information
isolation
- @ref: 9269
- sample type: soil
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_135.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_120;99_135&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: AB184158
- Sequence Identity:
- Total samples: 4030
- soil counts: 2441
- aquatic counts: 286
- animal counts: 1009
- plant counts: 294
Safety information
risk assessment
- @ref: 9269
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces flavovirens gene for 16S rRNA, partial sequence, strain: NBRC 12802 | AB184158 | 1454 | ena | 52258 |
| 20218 | Streptomyces flavovirens gene for 16S ribosomal RNA, partial sequence, strain: JCM 4223 | D44031 | 120 | ena | 52258 |
| 20218 | Streptomyces flavovirens strain NRRL B-2094T 16S ribosomal RNA gene, partial sequence | DQ442531 | 1497 | ena | 52258 |
GC content
- @ref: 67770
- GC-content: 68
- method: fluorimetric
External links
@ref: 9269
culture collection no.: DSM 40071, ATCC 19791, CBS 543.68, IFO 12802, IMRU 3067, ISP 5071, JCM 4223, JCM 4597, LMG 20048, NBRC 12802, NRRL B-2094, RIA 1070, BCRC 13672, CGMCC 4.1835, NCIMB 13019, VKM Ac-1888, VTT E-022182
straininfo link
- @ref: 84268
- straininfo: 265442
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9269 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40071) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40071 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 84268 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID265442.1 | StrainInfo: A central database for resolving microbial strain identifiers |