Strain identifier

BacDive ID: 151610

Type strain: No

Species: Sphingomonas sp.

NCBI tax ID(s): 28214 (species)

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General

@ref: 56318

BacDive-ID: 151610

keywords: Bacteria

description: Sphingomonas sp. CCUG 44447 is a bacterium that was isolated from Water,blood culture laboratory.

NCBI tax id

  • NCBI tax id: 28214
  • Matching level: species

doi: 10.13145/bacdive151610.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Sphingomonadales
  • family: Sphingomonadaceae
  • genus: Sphingomonas
  • species: Sphingomonas sp.
  • full scientific name: Sphingomonas Yabuuchi et al. 1990

@ref: 56318

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Sphingomonadales

family: Sphingomonadaceae

genus: Sphingomonas

species: Sphingomonas sp.

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56318C14:0714
    56318C15:03.915
    56318C16:09.216
    56318C17:01.617
    56318C15:0 ISO 3OH2.216.135
    56318C16:1 ω5c1.515.908
    56318C16:1 ω7c1815.819
    56318C17:1 ω6c10.816.862
    56318C18:1 ω5c0.917.919
    56318C18:1 ω7c /12t/9t36.117.824
    56318C18:2 ω6,9c/C18:0 ANTE1.217.724
    56318Unidentified1.214.282
    56318Unidentified216.297
    56318Unidentified0.717.174
    56318Unidentified0.818.076
    56318Unidentified2.818.137
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
56318-----+--++----------+

Isolation, sampling and environmental information

isolation

  • @ref: 56318
  • sample type: Water,blood culture laboratory
  • sampling date: 2000-09-06
  • geographic location: Luleå
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic
#Infection#Patient#Blood culture

External links

@ref: 56318

culture collection no.: CCUG 44447

straininfo link

  • @ref: 105706
  • straininfo: 110015

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56318Curators of the CCUGhttps://www.ccug.se/strain?id=44447Culture Collection University of Gothenburg (CCUG) (CCUG 44447)
68369Automatically annotated from API 20NE
105706Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID110015.1