Strain identifier

BacDive ID: 150906

Type strain: No

Species: Nocardia brasiliensis

NCBI tax ID(s): 37326 (species)

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General

@ref: 55523

BacDive-ID: 150906

keywords: Bacteria

description: Nocardia brasiliensis CCUG 42686 is a bacterium that was isolated from Human abscess,skin.

NCBI tax id

  • NCBI tax id: 37326
  • Matching level: species

doi: 10.13145/bacdive150906.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Nocardiaceae
  • genus: Nocardia
  • species: Nocardia brasiliensis
  • full scientific name: Nocardia brasiliensis (Lindenberg 1909) Pinoy 1913 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Discomyces brasiliensis

@ref: 55523

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Nocardiaceae

genus: Nocardia

species: Nocardia brasiliensis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea+hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease+3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • @reffatty acidpercentageECL
    55523C14:01.314
    55523C15:05.815
    55523C16:033.416
    55523C17:0117
    55523C18:04.918
    55523C16:1 ω11c0.415.757
    55523C16:1 ω7c/C15:0 ISO 2OH10.815.85
    55523C17:1 ω9c0.516.773
    55523C18:1 ω9c14.217.769
    55523TBSA 10Me18:013.518.392
    55523Unidentified2.314.922
    55523Unidentified0.716.155
    55523Unidentified4.916.287
    55523Unidentified3.717.705
    55523Unidentified118.087
    55523Unidentified1.818.129
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    55523C14:01.214
    55523C15:01.915
    55523C16:034.116
    55523C17:0117
    55523C18:05.318
    55523C16:1 ω7c/C15:0 ISO 2OH11.115.85
    55523C18:1 ω9c13.617.769
    55523C18:2 ω6,9c/C18:0 ANTE3.517.724
    55523C19:0 ANTEISO4.418.729
    55523TBSA 10Me18:013.518.392
    55523Unidentified1.116.162
    55523Unidentified5.916.292
    55523Unidentified218.093
    55523Unidentified1.318.306
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
55523---+--++++----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
55523-+-+-+----++-+-++++-

Isolation, sampling and environmental information

isolation

  • @ref: 55523
  • sample type: Human abscess,skin
  • sampling date: 1999-08-29
  • geographic location: Tromsö
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Other#Abscess
#Host Body-Site#Organ#Skin, Nail, Hair
#Infection#Patient

External links

@ref: 55523

culture collection no.: CCUG 42686

straininfo link

  • @ref: 105107
  • straininfo: 109344

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
55523Curators of the CCUGhttps://www.ccug.se/strain?id=42686Culture Collection University of Gothenburg (CCUG) (CCUG 42686)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
105107Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID109344.1