Strain identifier

BacDive ID: 150509

Type strain: No

Species: Mycobacterium abscessus

NCBI tax ID(s): 36809 (species)

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General

@ref: 55079

BacDive-ID: 150509

keywords: Bacteria, aerobe, mesophilic

description: Mycobacterium abscessus CCUG 41449 is an aerobe, mesophilic bacterium that was isolated from Human skin/bone,10-yr-old male.

NCBI tax id

  • NCBI tax id: 36809
  • Matching level: species

doi: 10.13145/bacdive150509.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium abscessus
  • full scientific name: Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992

  • synonyms

    @refsynonym
    20215Mycobacterium chelonae subsp. abscessus
    20215Mycobacterium chelonei subsp. abscessus
    20215Mycobacterium abscessus
    20215Mycobacteroides abscessus

@ref: 55079

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium abscessus

type strain: no

Morphology

colony morphology

  • @ref: 55079
  • incubation period: 2-3 days

Culture and growth conditions

culture temp

  • @ref: 55079
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 55079
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    55079C14:010.614
    55079C16:032.716
    55079C18:01.118
    55079C16:1 ω7c3.315.819
    55079C16:1 ω7c/C15:0 ISO 2OH13.815.85
    55079C16:1 ω9c2.115.774
    55079C17:1 ω8c1.616.792
    55079C18:1 ω9c22.817.769
    55079C18:2 ω6,9c/C18:0 ANTE6.417.724
    55079TBSA 10Me18:04.418.392
    55079unknown 13.7661.113.766
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
55079-+++--+-+-----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
55079-+++-+-+--++---++-+-

Isolation, sampling and environmental information

isolation

  • @ref: 55079
  • sample type: Human skin/bone,10-yr-old male
  • sampling date: 1998-11-10
  • geographic location: Borås
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body-Site#Other#Bone
#Host Body-Site#Organ#Skin, Nail, Hair
#Infection#Patient
#Host#Human#Child

External links

@ref: 55079

culture collection no.: CCUG 41449

straininfo link

  • @ref: 104756
  • straininfo: 302912

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
55079Curators of the CCUGhttps://www.ccug.se/strain?id=41449Culture Collection University of Gothenburg (CCUG) (CCUG 41449)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
104756Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID302912.1