Strain identifier
version 9.1 (current version)
General
@ref: 54827
BacDive-ID: 150288
keywords: genome sequence, Bacteria, Gram-negative
description: Proteus mirabilis CCUG 39506 is a Gram-negative bacterium of the family Morganellaceae.
NCBI tax id
- NCBI tax id: 584
- Matching level: species
doi: 10.13145/bacdive150288.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Morganellaceae
- genus: Proteus
- species: Proteus mirabilis
- full scientific name: Proteus mirabilis Hauser 1885 (Approved Lists 1980)
@ref: 54827
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Morganellaceae
genus: Proteus
species: Proteus mirabilis
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 98.985
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | no | 90.596 |
| 69481 | no | 93 |
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Proteus mirabilis ATCC 7002 | GCA_000755485 | scaffold | ncbi | 584 |
| 66792 | Proteus mirabilis strain ATCC 7002 | 584.57 | wgs | patric | 584 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 93 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 98.985 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 90.998 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 75.643 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 90.596 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 98.947 | no |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | yes | 74.415 | no |
External links
@ref: 54827
culture collection no.: CCUG 39506, ATCC 7002
straininfo link
- @ref: 104568
- straininfo: 9360
literature
| Pubmed-ID | title | authors | journal | DOI | year | topic | mesh |
|---|---|---|---|---|---|---|---|
| 25342681 | Draft Genome Assemblies of Proteus mirabilis ATCC 7002 and Proteus vulgaris ATCC 49132. | Minogue TD, Daligault HE, Davenport KW, Bishop-Lilly KA, Bruce DC, Chain PS, Coyne SR, Chertkov O, Freitas T, Frey KG, Jaissle J, Koroleva GI, Ladner JT, Palacios GF, Redden CL, Xu Y, Johnson SL | Genome Announc | 10.1128/genomeA.01064-14 | 2014 | ||
| 29432912 | In vitro evaluation of new 2-phenoxy-benzo[g][1,2,4]triazolo[1,5-a]quinazoline derivatives as antimicrobial agents. | Abuelizz HA, El-Dib RA, Marzouk M, Al-Salahi R | Microb Pathog | 10.1016/j.micpath.2018.02.018 | 2018 | Pathogenicity | Anti-Bacterial Agents/chemical synthesis/pharmacology, Anti-Infective Agents/chemical synthesis/*pharmacology, Antifungal Agents/chemical synthesis/pharmacology, Fungi/*drug effects, Gram-Negative Bacteria/*drug effects, Gram-Positive Bacteria/*drug effects, Microbial Sensitivity Tests, Molecular Structure, Quinazolines/chemical synthesis/*pharmacology, Structure-Activity Relationship |
| 34438944 | Facile Green, Room-Temperature Synthesis of Gold Nanoparticles Using Combretum erythrophyllum Leaf Extract: Antibacterial and Cell Viability Studies against Normal and Cancerous Cells. | Fanoro OT, Parani S, Maluleke R, Lebepe TC, Varghese JR, Mavumengwana V, Oluwafemi OS | Antibiotics (Basel) | 10.3390/antibiotics10080893 | 2021 | ||
| 35272045 | Lactobacillus spp. derived biosurfactants effect on expression of genes involved in Proteus mirabilis biofilm formation. | Shokouhfard M, Kermanshahi RK, Feizabadi MM, Teimourian S, Safari F | Infect Genet Evol | 10.1016/j.meegid.2022.105264 | 2022 | Pathogenicity | Biofilms, *Cross Infection, Female, Humans, Lactobacillus, Male, Proteus mirabilis, *Urinary Tract Infections |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 54827 | Curators of the CCUG | https://www.ccug.se/strain?id=39506 | Culture Collection University of Gothenburg (CCUG) (CCUG 39506) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 104568 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID9360.1 |