Strain identifier

BacDive ID: 150252

Type strain: No

Species: Methylobacterium sp.

NCBI tax ID(s): 409 (species)

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General

@ref: 54777

BacDive-ID: 150252

keywords: Bacteria

description: Methylobacterium sp. CCUG 39392 is a bacterium that was isolated from Contaminant.

NCBI tax id

  • NCBI tax id: 409
  • Matching level: species

doi: 10.13145/bacdive150252.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Methylobacteriaceae
  • genus: Methylobacterium
  • species: Methylobacterium sp.
  • full scientific name: Methylobacterium Patt et al. 1976 (Approved Lists 1980)

@ref: 54777

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Hyphomicrobiales

family: Methylobacteriaceae

genus: Methylobacterium

species: Methylobacterium sp.

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea+hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease+3.5.1.5
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    54777C16:05.316
    54777C18:05.118
    54777C14:0 3OH/C16:1 ISO I115.485
    54777C16:1 ω7c0.815.819
    54777C18:1 ω7c /12t/9t82.517.824
    54777C18:1 ω9c1.717.769
    54777C18:2 ω6,9c/C18:0 ANTE2.617.724
    54777unknown 14.966114.966
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
54777+---+---------------+

Isolation, sampling and environmental information

isolation

  • @ref: 54777
  • sample type: Contaminant
  • sampling date: 1998-04-01
  • country: Austria
  • origin.country: AUT
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Contamination
#Engineered#Laboratory#Contaminant

External links

@ref: 54777

culture collection no.: CCUG 39392

straininfo link

  • @ref: 104534
  • straininfo: 108772

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
54777Curators of the CCUGhttps://www.ccug.se/strain?id=39392Culture Collection University of Gothenburg (CCUG) (CCUG 39392)
68369Automatically annotated from API 20NE
104534Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID108772.1