Strain identifier

BacDive ID: 150153

Type strain: No

Species: Mycobacterium novocastrense

NCBI tax ID(s): 59813 (species)

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General

@ref: 54659

BacDive-ID: 150153

keywords: Bacteria

description: Mycobacterium novocastrense CCUG 39118 is a bacterium that was isolated from Human sputum.

NCBI tax id

  • NCBI tax id: 59813
  • Matching level: species

doi: 10.13145/bacdive150153.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium novocastrense
  • full scientific name: Mycobacterium novocastrense Shojaei et al. 1997

  • synonyms

    • @ref: 20215
    • synonym: Mycolicibacterium novocastrense

@ref: 54659

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium novocastrense

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837916199urea+hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease+3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase+3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • @reffatty acidpercentageECL
    54659C14:07.214
    54659C15:00.315
    54659C16:022.416
    54659C18:0118
    54659C20:00.920
    5465911 methyl 18:1 ω7c1.318.081
    54659C15:0 ISO 3OH0.416.135
    54659C16:0 anteiso0.515.717
    54659C16:1 ω7c0.715.819
    54659C16:1 ω7c/C15:0 ISO 2OH8.215.85
    54659C16:1 ω9c115.774
    54659C17:1 ω7c30.816.818
    54659C18:1 ω9c21.417.769
    54659C18:2 ω6,9c/C18:0 ANTE1.717.724
    54659TBSA 10Me18:01.718.392
    54659Unidentified0.414.812
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    54659C14:08.514
    54659C16:019.916
    54659C20:00.620
    5465911 methyl 18:1 ω7c1.118.081
    54659C16:1 ω7c/C15:0 ISO 2OH9.315.85
    54659C16:1 ω9c1.215.774
    54659C17:1 ω7c33.416.818
    54659C18:1 ω9c15.717.769
    54659C20:0 alcohol (C20:0 2OH alc)7.118.835
    54659TBSA 10Me18:03.218.392
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
54659++++--+-++----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
54659-+++-+-++-++----+---

Isolation, sampling and environmental information

isolation

  • @ref: 54659
  • sample type: Human sputum
  • sampling date: 1992-02-01
  • geographic location: Oslo
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Sputum

External links

@ref: 54659

culture collection no.: CCUG 39118

straininfo link

  • @ref: 104456
  • straininfo: 55607

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
54659Curators of the CCUGhttps://www.ccug.se/strain?id=39118Culture Collection University of Gothenburg (CCUG) (CCUG 39118)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
104456Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID55607.1