Strain identifier

BacDive ID: 14995

Type strain: No

Species: Streptomyces anulatus

Strain history: KCC S-0356 <-- IFO 12853 <-- SAJ <-- ISP 5265 <-- RIA 648 <-- INMI 2292.

NCBI tax ID(s): 1892 (species)

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General

@ref: 9418

BacDive-ID: 14995

DSM-Number: 40265

keywords: genome sequence, 16S sequence, Bacteria, mesophilic, antibiotic compound production

description: Streptomyces anulatus DSM 40265 is a mesophilic bacterium that produces antibiotic compounds and was isolated from soil.

NCBI tax id

  • NCBI tax id: 1892
  • Matching level: species

strain history

@refhistory
9418<- E.B. Shirling, ISP <- N.A. Krassilnikov, RIA
67770KCC S-0356 <-- IFO 12853 <-- SAJ <-- ISP 5265 <-- RIA 648 <-- INMI 2292.

doi: 10.13145/bacdive14995.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces anulatus
  • full scientific name: Streptomyces anulatus (Beijerinck 1912) Waksman 1953 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Streptomyces fluorescens
    20215Streptomyces chrysomallus
    20215Actinomyces fluorescens
    20215Streptomyces citreofluorescens
    20215Actinomyces praecox
    20215Actinomyces citreofluorescens
    20215Streptomyces praecox

@ref: 9418

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces anulatus

full scientific name: Streptomyces anulatus (Beijerinck 1912) Waksman 1953 emend. Lanoot et al. 2005

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9418GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9418STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf

culture temp

@refgrowthtypetemperaturerange
9418positivegrowth28mesophilic
67770positivegrowth28mesophilic

Physiology and metabolism

compound production

@refcompound
9418actinomycin C
9418anti-bacterial antibiotic
9418anti-fungal antibiotic

metabolite production

  • @ref: 67770
  • metabolite: actinomycin C
  • production: yes

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.country
9418soil
67770SoilKola PeninsulaRussiaRUS

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_135.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_120;99_135&stattab=map
  • Last taxonomy: Streptomyces
  • 16S sequence: HQ995503
  • Sequence Identity:
  • Total samples: 4030
  • soil counts: 2441
  • aquatic counts: 286
  • animal counts: 1009
  • plant counts: 294

Safety information

risk assessment

  • @ref: 9418
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces anulatus gene for 16S rRNA, partial sequence, strain: NBRC 12853AB1841951474ena1892
20218Streptomyces citreofluorescens strain DSM 40265 16S ribosomal RNA gene, partial sequenceGU383164779ena1892
67770Streptomyces anulatus strain NRRL B-3362 16S ribosomal RNA gene, partial sequenceAY9997971353ena1892
67770Streptomyces anulatus strain KCTC 9710 16S ribosomal RNA gene, partial sequenceHQ9955031403ena1892

Genome sequences

  • @ref: 67770
  • description: Streptomyces anulatus NRRL B-3362
  • accession: GCA_000717105
  • assembly level: contig
  • database: ncbi
  • NCBI tax ID: 1892

GC content

@refGC-contentmethod
6777071.3genome sequence analysis
6777072fluorimetric
6777072high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno94.684no
flagellatedno97.989no
gram-positiveyes91.208no
anaerobicno99.441no
halophileno90.946no
spore-formingyes92.78no
thermophileno99.48yes
glucose-utilyes89.005no
aerobicyes92.179no
glucose-fermentno86.773no

External links

@ref: 9418

culture collection no.: DSM 40265, AS 4.1652, ATCC 15858, ATCC 23898, CBS 684.68, IFO 12853, INMI 2292, ISP 5265, LMG 20475, NBRC 12853, RIA 1187, RIA 648, JCM 4356, BCRC 11820, CGMCC 4.1652, KCTC 9710, MTCC 2528, NCIMB 9806, NRRL B-3362, VKM Ac-96

straininfo link

  • @ref: 84103
  • straininfo: 92836

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9418Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40265)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40265
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
84103Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID92836.1StrainInfo: A central database for resolving microbial strain identifiers