Strain identifier
BacDive ID: 14994
Type strain: 
Species: Streptomyces anulatus
Strain history: KCC S-0373 <-- IFO 12861 <-- SAJ <-- ISP 5203 <-- INMI 592.
NCBI tax ID(s): 1892 (species)
version 9.1 (current version)
General
@ref: 9377
BacDive-ID: 14994
DSM-Number: 40203
keywords: genome sequence, 16S sequence, Bacteria, spore-forming, Gram-positive, antibiotic compound production
description: Streptomyces anulatus DSM 40203 is a spore-forming, Gram-positive bacterium that produces antibiotic compounds and was isolated from soil.
NCBI tax id
- NCBI tax id: 1892
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9377 | <- E.B. Shirling, ISP <- N.A. Krassilnikov, INMI |
| 67770 | KCC S-0373 <-- IFO 12861 <-- SAJ <-- ISP 5203 <-- INMI 592. |
doi: 10.13145/bacdive14994.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces anulatus
- full scientific name: Streptomyces anulatus (Beijerinck 1912) Waksman 1953 (Approved Lists 1980)
synonyms
@ref synonym 20215 Streptomyces fluorescens 20215 Streptomyces chrysomallus 20215 Actinomyces fluorescens 20215 Streptomyces citreofluorescens 20215 Actinomyces praecox 20215 Actinomyces citreofluorescens 20215 Streptomyces praecox
@ref: 9377
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces anulatus
full scientific name: Streptomyces anulatus (Beijerinck 1912) Waksman 1953 emend. Lanoot et al. 2005
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: positive
- confidence: 91.429
Culture and growth conditions
culture medium
- @ref: 9377
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 9377 | positive | growth | 28 |
| 67770 | positive | growth | 28 |
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: yes
- confidence: 91.222
compound production
- @ref: 9377
- compound: actinomycin X
metabolite production
- @ref: 67770
- metabolite: actinomycin X
- production: yes
Isolation, sampling and environmental information
isolation
| @ref | sample type | country | continent | origin.country |
|---|---|---|---|---|
| 9377 | soil | USSR | Asia | |
| 67770 | Soil | Belarus | Europe | BLR |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_135.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_120;99_135&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: DQ026639
- Sequence Identity:
- Total samples: 4030
- soil counts: 2441
- aquatic counts: 286
- animal counts: 1009
- plant counts: 294
Safety information
risk assessment
- @ref: 9377
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces anulatus gene for 16S rRNA, partial sequence, strain: NBRC 12861 | AB184199 | 1451 | nuccore | 1892 |
| 20218 | Streptomyces anulatus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4373 | D44089 | 120 | nuccore | 1892 |
| 20218 | Streptomyces anulatus strain NRRL B-2873 16S ribosomal RNA gene, partial sequence | DQ026639 | 1471 | nuccore | 1892 |
Genome sequences
- @ref: 67770
- description: Streptomyces anulatus NRRL B-2873
- accession: GCA_000721175
- assembly level: contig
- database: ncbi
- NCBI tax ID: 1892
GC content
| @ref | GC-content | method |
|---|---|---|
| 67770 | 71 | fluorimetric |
| 67770 | 71.3 | genome sequence analysis |
| 67770 | 71 | high performance liquid chromatography (HPLC) |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 91.429 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 98.299 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 85.315 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 91.222 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 98 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 87 | no |
External links
@ref: 9377
culture collection no.: DSM 40203, ATCC 15860, ATCC 23907, CBS 803.68, IFO 12861, INMI 592, ISP 5203, JCM 4373, LMG 8579, NBRC 12861, NRRL B-2873, RIA 1154, RIA 647, BCRC 11475, CECT 3130, NCIMB 9851, VKM Ac-147
straininfo link
- @ref: 84102
- straininfo: 13506
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9377 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40203) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40203 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 84102 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID13506.1 | StrainInfo: A central database for resolving microbial strain identifiers |