Strain identifier

BacDive ID: 149922

Type strain: No

Species: Eubacterium sp.

NCBI tax ID(s): 142586 (species)

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General

@ref: 54395

BacDive-ID: 149922

keywords: Bacteria, obligate anaerobe, mesophilic

description: Eubacterium sp. CCUG 38686 is an obligate anaerobe, mesophilic bacterium that was isolated from Human pleural fluid.

NCBI tax id

  • NCBI tax id: 142586
  • Matching level: species

doi: 10.13145/bacdive149922.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Eubacteriaceae
  • genus: Eubacterium
  • species: Eubacterium sp.
  • full scientific name: Eubacterium Prévot 1938 (Approved Lists 1980)

@ref: 54395

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Eubacteriales

family: Eubacteriaceae

genus: Eubacterium

species: Eubacterium sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 54395
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 54395
  • oxygen tolerance: obligate anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838016199urea-hydrolysis
6838029016arginine-hydrolysis
6838016024D-mannose+fermentation
6838016634raffinose-fermentation
6838029985L-glutamate-degradation
6838017632nitrate-reduction
6838027897tryptophan-energy source

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68380serine arylamidase+
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase+
68380glycin arylamidase+
68380alanine arylamidase+3.4.11.2
68380tyrosine arylamidase+
68380pyrrolidonyl arylamidase+3.4.19.3
68380leucine arylamidase+3.4.11.1
68380phenylalanine arylamidase+
68380leucyl glycin arylamidase+3.4.11.1
68380proline-arylamidase-3.4.11.5
68380L-arginine arylamidase+
68380alkaline phosphatase+3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380N-acetyl-beta-glucosaminidase+3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase-3.2.1.21
68380alpha-glucosidase-3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase+3.2.1.23
68380alpha-galactosidase-3.2.1.22
68380arginine dihydrolase-3.5.3.6
68380urease-3.5.1.5

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
54395---+-----++-----++-++++++++-+

Isolation, sampling and environmental information

isolation

  • @ref: 54395
  • sample type: Human pleural fluid
  • sampling date: 1997-10-23
  • geographic location: Linköping
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Oral cavity and Airways#Pleural fluid
#Infection#Patient
#Host Body-Site#Oral cavity and airways

External links

@ref: 54395

culture collection no.: CCUG 38686

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
54395Curators of the CCUGhttps://www.ccug.se/strain?id=38686Culture Collection University of Gothenburg (CCUG) (CCUG 38686)
68380Automatically annotated from API rID32A