Strain identifier
BacDive ID: 14980
Type strain: 
Species: Streptomyces antibioticus
Strain Designation: Tü 99
Strain history: KCC S-0980 <-- DSM 40725 <-- H. Zähner Tü 99 (ETH 31305).
NCBI tax ID(s): 1890 (species)
version 9 (current version)
General
@ref: 9728
BacDive-ID: 14980
DSM-Number: 40725
keywords: genome sequence, Bacteria, antibiotic compound production
description: Streptomyces antibioticus Tü 99 is a bacterium that produces antibiotic compounds.
NCBI tax id
- NCBI tax id: 1890
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9728 | <- H. Zähner, Tü 99 <- ETH, 31305 |
| 67770 | KCC S-0980 <-- DSM 40725 <-- H. Zähner Tü 99 (ETH 31305). |
doi: 10.13145/bacdive14980.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces antibioticus
- full scientific name: Streptomyces antibioticus (Waksman and Woodruff 1941) Waksman and Henrici 1948 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Actinomyces antibioticus
@ref: 9728
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces antibioticus
full scientific name: Streptomyces antibioticus (Waksman and Woodruff 1941) Waksman and Henrici 1948 emend. Nouioui et al. 2018
strain designation: Tü 99
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9728 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9728 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 9728 | positive | growth | 28 |
| 67770 | positive | growth | 28 |
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 9728 | chlorothricin |
| 9728 | ketomycin |
metabolite production
| @ref | metabolite | production |
|---|---|---|
| 67770 | chlorothricin | yes |
| 67770 | ketomycin | yes |
Safety information
risk assessment
- @ref: 9728
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Streptomyces antibioticus DSM 40725
- accession: 651716937
- assembly level: draft
- database: img
- NCBI tax ID: 1890
External links
@ref: 9728
culture collection no.: DSM 40725, JCM 4980, ETH 31305, BCRC 12042, CECT 3234
straininfo link
- @ref: 84089
- straininfo: 49770
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Enzymology | 16677607 | Cloning and characterization of a bacterial iterative type I polyketide synthase gene encoding the 6-methylsalicyclic acid synthase. | Shao L, Qu XD, Jia XY, Zhao QF, Tian ZH, Wang M, Tang GL, Liu W | Biochem Biophys Res Commun | 10.1016/j.bbrc.2006.04.069 | 2006 | Acyltransferases/*genetics, Bacterial Proteins/genetics, Base Sequence, Cloning, Molecular/*methods, Ligases/*genetics, Molecular Sequence Data, Multienzyme Complexes/*genetics, Oxidoreductases/*genetics, Polyketide Synthases/*genetics, Streptomyces antibioticus/*genetics/*metabolism | Genetics |
| Metabolism | 16793515 | Genetic characterization of the chlorothricin gene cluster as a model for spirotetronate antibiotic biosynthesis. | Jia XY, Tian ZH, Shao L, Qu XD, Zhao QF, Tang J, Tang GL, Liu W | Chem Biol | 10.1016/j.chembiol.2006.03.008 | 2006 | Amino Acid Sequence, Aminoglycosides/chemistry/*genetics/*metabolism, Anti-Bacterial Agents/*biosynthesis/chemistry, Carbohydrate Metabolism, Chlorine/chemistry, Chromatography, High Pressure Liquid, Cloning, Molecular, Conserved Sequence, Drug Resistance, Bacterial/drug effects, Gene Expression Regulation, Bacterial, Models, Genetic, Molecular Sequence Data, Molecular Structure, Multigene Family/*genetics, Oxidation-Reduction, Salicylates/chemistry/metabolism, Sequence Alignment, Streptomyces antibioticus/genetics/metabolism | Enzymology |
| Biotechnology | 32974326 | Co-expression of a SARP Family Activator ChlF2 and a Type II Thioesterase ChlK Led to High Production of Chlorothricin in Streptomyces antibioticus DSM 40725. | Li Y, Zhang J, Zheng J, Guan H, Liu W, Tan H | Front Bioeng Biotechnol | 10.3389/fbioe.2020.01013 | 2020 |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 9728 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40725) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40725 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 84089 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49770.1 | StrainInfo: A central database for resolving microbial strain identifiers |