Strain identifier
version 8.1 (current version)
General
@ref: 54146
BacDive-ID: 149706
keywords: Bacteria, anaerobe, mesophilic
description: Escherichia coli CCUG 38249 is an anaerobe, mesophilic bacterium that was isolated from Human urine.
NCBI tax id
- NCBI tax id: 562
- Matching level: species
doi: 10.13145/bacdive149706.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Escherichia
- species: Escherichia coli
- full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus coli
@ref: 54146
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Escherichia
species: Escherichia coli
type strain: no
Culture and growth conditions
culture temp
- @ref: 54146
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 54146
- oxygen tolerance: anaerobe
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 54146 C12:0 5 12 54146 C14:0 10.7 14 54146 C15:0 0.5 15 54146 C16:0 40.5 16 54146 C17:0 0.2 17 54146 C18:0 1 18 54146 C14:0 3OH/C16:1 ISO I 5.9 15.485 54146 C16:1 ω7c 10.3 15.819 54146 C17:0 CYCLO 7.6 16.888 54146 C18:1 ω7c /12t/9t 12.6 17.824 54146 C18:1 ω9c 0.9 17.769 54146 C18:2 ω6,9c/C18:0 ANTE 1.8 17.724 54146 C19:0 CYCLO ω8c 2.1 18.9 54146 Unidentified 0.6 54146 unknown 14.503 0.5 14.503 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 54146
- sample type: Human urine
- sampling date: 1997-07-01
- geographic location: Borås
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body Product | #Fluids | #Urine |
External links
@ref: 54146
culture collection no.: CCUG 38249
straininfo link
- @ref: 104071
- straininfo: 53895
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 54146 | Curators of the CCUG | https://www.ccug.se/strain?id=38249 | Culture Collection University of Gothenburg (CCUG) (CCUG 38249) | |
| 104071 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID53895.1 |