Strain identifier

BacDive ID: 149608

Type strain: No

Species: Paenibacillus amylolyticus

NCBI tax ID(s): 1451 (species)

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General

@ref: 54041

BacDive-ID: 149608

keywords: Bacteria

description: Paenibacillus amylolyticus CCUG 38066 is a bacterium that was isolated from Human cerebrospinal fluid.

NCBI tax id

  • NCBI tax id: 1451
  • Matching level: species

doi: 10.13145/bacdive149608.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Paenibacillus
  • species: Paenibacillus amylolyticus
  • full scientific name: Paenibacillus amylolyticus (Nakamura 1984 ex Choukévitch 1911) Ash et al. 1994

  • synonyms

    • @ref: 20215
    • synonym: Bacillus amylolyticus

@ref: 54041

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus amylolyticus

type strain: no

Physiology and metabolism

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose-builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose-builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose-builds acid from15824
68371D-glucose-builds acid from17634
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose-builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    54041C14:01.514
    54041C15:02.515
    54041C16:04.816
    54041C14:0 ISO2.513.618
    54041C15:0 ANTEISO53.114.711
    54041C15:0 ISO8.714.621
    54041C16:0 iso11.415.626
    54041C16:1 ω11c215.757
    54041C16:1 ω7c alcohol2.815.386
    54041C17:0 anteiso6.416.722
    54041C17:0 iso2.116.629
    54041C18:2 ω6,9c/C18:0 ANTE2.117.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
54041--------------------------------------------------

Isolation, sampling and environmental information

isolation

  • @ref: 54041
  • sample type: Human cerebrospinal fluid
  • sampling date: 1997-06-01
  • geographic location: Huddinge
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Cerebrospinal fluid
#Infection#Patient

External links

@ref: 54041

culture collection no.: CCUG 38066

straininfo link

  • @ref: 103982
  • straininfo: 56028

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
54041Curators of the CCUGhttps://www.ccug.se/strain?id=38066Culture Collection University of Gothenburg (CCUG) (CCUG 38066)
68371Automatically annotated from API 50CH acid
103982Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56028.1