Strain identifier
version 8.1 (current version)
General
@ref: 54018
BacDive-ID: 149586
keywords: Bacteria, microaerophile, mesophilic
description: Helicobacter sp. CCUG 38014 is a microaerophile, mesophilic bacterium that was isolated from Not known.
NCBI tax id
- NCBI tax id: 218
- Matching level: species
doi: 10.13145/bacdive149586.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Epsilonproteobacteria
- order: Campylobacterales
- family: Helicobacteraceae
- genus: Helicobacter
- species: Helicobacter sp.
- full scientific name: Helicobacter Goodwin et al. 1989
synonyms
- @ref: 20215
- synonym: Pseudohelicobacter
@ref: 54018
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Helicobacteraceae
genus: Helicobacter
species: Helicobacter sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 54018
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 54018
- oxygen tolerance: microaerophile
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68373 | 16199 | urea | - | hydrolysis |
| 68373 | 17632 | nitrate | - | reduction |
| 68373 | 606565 | hippurate | - | hydrolysis |
| 68373 | 78019 | triphenyltetrazolium chloride | + | reduction |
| 68373 | 17634 | D-glucose | - | assimilation |
| 68373 | 30031 | succinate | - | assimilation |
| 68373 | 30089 | acetate | - | assimilation |
| 68373 | 17272 | propionate | - | assimilation |
| 68373 | 25115 | malate | - | assimilation |
| 68373 | 16947 | citrate | - | assimilation |
antibiotic resistance
| @ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. |
|---|---|---|---|---|---|
| 68373 | 48923 | erythromycin | yes | yes | 14 µg |
| 68373 | 474053 | cefazolin | yes | yes | 224 µg |
| 68373 | 100147 | nalidixic acid | yes | yes | 84 µg |
metabolite production
- @ref: 68373
- Chebi-ID: 16136
- metabolite: hydrogen sulfide
- production: no
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68373 | catalase | + | 1.11.1.6 |
| 68373 | alkaline phosphatase | + | 3.1.3.1 |
| 68373 | L-aspartate arylamidase | - | 3.4.11.21 |
| 68373 | L-arginine arylamidase | - | |
| 68373 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
| 68373 | gamma-glutamyltransferase | - | 2.3.2.2 |
| 68373 | esterase | + | |
| 68373 | urease | - | 3.5.1.5 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 54018 C12:0 3 12 54018 C13:0 0.3 13 54018 C14:0 13.8 14 54018 C15:0 0.7 15 54018 C16:0 32.8 16 54018 C17:0 0.7 17 54018 C18:0 0.8 18 54018 C13:0 3OH/C15:1 i I/H 0.3 14.469 54018 C14:0 3OH/C16:1 ISO I 4.2 15.485 54018 C16:0 3OH 4.2 17.52 54018 C16:0 aldehyde 1.9 14.949 54018 C16:1 ω7c 0.2 15.819 54018 C17:1 ISO I/C16:0 DMA 8.6 16.481 54018 C17:1 ω6c 0.2 16.862 54018 C18:1 ω7c /12t/9t 26.9 17.824 54018 C18:1 ω9c 0.2 17.769 54018 C18:2 ω6,9c/C18:0 ANTE 0.9 17.724 54018 Unidentified 0.2 13.74 54018 Unidentified 0.2 15.947 54018 Unidentified 0.3 18.286 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API CAM
| @ref | URE | NIT | EST | HIP | GGT | TTC | PYRA | ArgA | AspA | PAL | H2S | GLU | SUT | NAL | CFZ | ACE | PROP | MLT | CIT | ERO | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54018 | - | - | + | - | - | + | - | - | - | + | - | - | - | - | - | - | - | - | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 54018
- sample type: Not known
- sampling date: 1997-06-02
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
External links
@ref: 54018
culture collection no.: CCUG 38014
straininfo link
- @ref: 103963
- straininfo: 108680
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 54018 | Curators of the CCUG | https://www.ccug.se/strain?id=38014 | Culture Collection University of Gothenburg (CCUG) (CCUG 38014) | |
| 68373 | Automatically annotated from API CAM | |||
| 103963 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID108680.1 |