Strain identifier

BacDive ID: 149442

Type strain: No

Species: Bacteroides fragilis

NCBI tax ID(s): 817 (species)

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General

@ref: 53847

BacDive-ID: 149442

keywords: Bacteria, anaerobe

description: Bacteroides fragilis CCUG 37758 is an anaerobe bacterium that was isolated from Human blood,79-yr-old man.

NCBI tax id

  • NCBI tax id: 817
  • Matching level: species

doi: 10.13145/bacdive149442.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Bacteroidaceae
  • genus: Bacteroides
  • species: Bacteroides fragilis
  • full scientific name: Bacteroides fragilis (Veillon and Zuber 1898) Castellani and Chalmers 1919 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacillus fragilis

@ref: 53847

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Bacteroidaceae

genus: Bacteroides

species: Bacteroides fragilis

type strain: no

Morphology

colony morphology

  • @ref: 53847
  • incubation period: 2 days

Culture and growth conditions

culture temp

  • @ref: 53847
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 53847
  • oxygen tolerance: anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838016199urea-hydrolysis
6838029016arginine-hydrolysis
6838016024D-mannose+fermentation
6838016634raffinose+fermentation
6838029985L-glutamate+degradation
6838017632nitrate-reduction
6838027897tryptophan-energy source

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68380serine arylamidase-
68380glutamyl-glutamate arylamidase+
68380histidine arylamidase+
68380glycin arylamidase-
68380alanine arylamidase+3.4.11.2
68380tyrosine arylamidase-
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucine arylamidase+3.4.11.1
68380phenylalanine arylamidase+
68380leucyl glycin arylamidase+3.4.11.1
68380proline-arylamidase-3.4.11.5
68380L-arginine arylamidase+
68380alkaline phosphatase+3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase+3.2.1.51
68380glutamate decarboxylase+4.1.1.15
68380N-acetyl-beta-glucosaminidase+3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase+3.2.1.21
68380alpha-glucosidase+3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase+3.2.1.23
68380alpha-galactosidase+3.2.1.22
68380arginine dihydrolase-3.5.3.6
68380urease-3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53847C14:00.814
    53847C15:02.415
    53847C16:07.916
    53847C13:0 iso0.812.612
    53847C15:0 ANTEISO37.514.711
    53847C15:0 ISO20.214.621
    53847C16:0 3OH517.52
    53847C16:0 iso0.615.626
    53847C17:0 iso 3OH14.618.161
    53847C18:1 ω9c1.417.769
    53847C18:2 ω6,9c/C18:0 ANTE1.517.724
    53847Unidentified1.519.612
    53847unknown 13.5664.913.566
    53847unknown 16.5800.816.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
53847--++-++--+++++--++-+++--+-++-

Isolation, sampling and environmental information

isolation

  • @ref: 53847
  • sample type: Human blood,79-yr-old man
  • sampling date: 1997-04-06
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 53847

culture collection no.: CCUG 37758

straininfo link

  • @ref: 103857
  • straininfo: 51879

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53847Curators of the CCUGhttps://www.ccug.se/strain?id=37758Culture Collection University of Gothenburg (CCUG) (CCUG 37758)
68380Automatically annotated from API rID32A
103857Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID51879.1