Strain identifier

BacDive ID: 149432

Type strain: No

Species: Enterococcus columbae

NCBI tax ID(s): 1355 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 53837

BacDive-ID: 149432

keywords: Bacteria

description: Enterococcus columbae CCUG 37734 is a bacterium that was isolated from Human blood,54-yr-old man,transplanted.

NCBI tax id

  • NCBI tax id: 1355
  • Matching level: species

doi: 10.13145/bacdive149432.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Enterococcaceae
  • genus: Enterococcus
  • species: Enterococcus columbae
  • full scientific name: Enterococcus columbae Devriese et al. 1993

@ref: 53837

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Enterococcaceae

genus: Enterococcus

species: Enterococcus columbae

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838129016arginine-hydrolysis
6838116988D-ribose+builds acid from
6838116899D-mannitol+builds acid from
6838130911sorbitol+builds acid from
6838117716lactose+builds acid from
6838127082trehalose+builds acid from
6838116634raffinose+builds acid from
6838117992sucrose+builds acid from
6838130849L-arabinose+builds acid from
6838118333D-arabitol+builds acid from
6838140585alpha-cyclodextrin+builds acid from
68381606565hippurate-hydrolysis
6838128087glycogen-builds acid from
6838127941pullulan-builds acid from
6838117306maltose+builds acid from
6838128053melibiose+builds acid from
683816731melezitose-builds acid from
68381320055methyl beta-D-glucopyranoside+builds acid from
6838116443D-tagatose-builds acid from
6838116199urea-hydrolysis

metabolite production

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68381urease-3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase+
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase-3.4.19.3
68381beta-galactosidase+3.2.1.23
68381Alanyl-Phenylalanyl-Proline arylamidase-
68381alkaline phosphatase+3.1.3.1
68381alpha-galactosidase+3.2.1.22
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase+3.2.1.21
68381arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53837C14:011.514
    53837C16:025.616
    53837C18:02.318
    53837C13:0 ISO 2OH1.113.814
    53837C16:1 ω7c7.715.819
    53837C16:1 ω7c/C15:0 ISO 2OH3.615.85
    53837C18:1 ω7c /12t/9t40.317.824
    53837C18:1 ω9c2.417.769
    53837C18:2 ω6,9c/C18:0 ANTE4.717.724
    53837Unidentified0.918.28
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
53837-++-+++++++++++++-+--+---++-+---

Isolation, sampling and environmental information

isolation

  • @ref: 53837
  • sample type: Human blood,54-yr-old man,transplanted
  • sampling date: 1997-04-01
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Medical environment#Medical practice
#Infection#Patient

External links

@ref: 53837

culture collection no.: CCUG 37734

straininfo link

  • @ref: 103848
  • straininfo: 53552

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53837Curators of the CCUGhttps://www.ccug.se/strain?id=37734Culture Collection University of Gothenburg (CCUG) (CCUG 37734)
68381Automatically annotated from API rID32STR
103848Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID53552.1