Strain identifier

BacDive ID: 149143

Type strain: No

Species: Simonsiella sp.

Variant: EF group 62

NCBI tax ID(s): 254438 (species)

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General

@ref: 53498

BacDive-ID: 149143

keywords: Bacteria

description: Simonsiella sp. CCUG 36929 is a bacterium that was isolated from Human gingiva.

NCBI tax id

  • NCBI tax id: 254438
  • Matching level: species

doi: 10.13145/bacdive149143.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Neisseriales
  • family: Neisseriaceae
  • genus: Simonsiella
  • species: Simonsiella sp.
  • full scientific name: Simonsiella Schmid 1922 (Approved Lists 1980)

@ref: 53498

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Neisseriales

family: Neisseriaceae

genus: Simonsiella

species: Simonsiella sp.

variant: EF group 62

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose-builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase+3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase-3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53498C12:018.812
    53498C14:034.614
    53498C16:017.916
    53498C18:00.718
    53498C10:0 3OH0.311.423
    53498C12:0 3OH5.413.455
    53498C12:0 ALDE ?110.915
    53498C13:0 ISO 2OH1.113.814
    53498C14:0 3OH/C16:1 ISO I1.615.485
    53498C16:1 ω7c13.515.819
    53498C18:2 ω6,9c/C18:0 ANTE1.917.724
    53498Unidentified2.817.798
    53498Unidentified0.518.563
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
53498--++-+--------------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
53498-+--------+--

Isolation, sampling and environmental information

isolation

  • @ref: 53498
  • sample type: Human gingiva
  • sampling date: 1996-11-01
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Oral cavity and airways#Gingiva
#Infection#Patient

External links

@ref: 53498

culture collection no.: CCUG 36929

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53498Curators of the CCUGhttps://www.ccug.se/strain?id=36929Culture Collection University of Gothenburg (CCUG) (CCUG 36929)
68377Automatically annotated from API NH
68382Automatically annotated from API zym