Strain identifier
BacDive ID: 14908
Type strain: 
Species: Streptomyces albidoflavus
Strain history: <- NRRL
NCBI tax ID(s): 1886 (species)
version 9 (current version)
General
@ref: 9799
BacDive-ID: 14908
DSM-Number: 40792
keywords: 16S sequence, Bacteria
description: Streptomyces albidoflavus DSM 40792 is a bacterium of the family Streptomycetaceae.
NCBI tax id
- NCBI tax id: 1886
- Matching level: species
strain history
- @ref: 9799
- history: <- NRRL
doi: 10.13145/bacdive14908.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces albidoflavus
- full scientific name: Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 (Approved Lists 1980)
synonyms
@ref synonym 20215 Streptomyces griseus subsp. solvifaciens 20215 Streptomyces limosus 20215 Actinomyces sampsonii 20215 Actinomyces globisporus subsp. caucasicus 20215 Cladothrix odorifera 20215 Streptomyces felleus 20215 Streptomyces sampsonii 20215 Streptomyces odorifer 20215 Streptomyces coelicolor 20215 Streptothrix coelicolor 20215 Streptotrix albidoflava 20215 Streptomyces globisporus subsp. caucasicus 20215 Streptomyces canescens 20215 Streptomyces champavatii
@ref: 9799
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces albidoflavus
full scientific name: Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 emend. Nouioui et al. 2018
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9799 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9799 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
- @ref: 9799
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
compound production
- @ref: 9799
- compound: streptothricin A
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_720.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_91;97_287;98_384;99_720&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: Z76677
- Sequence Identity:
- Total samples: 129
- soil counts: 39
- aquatic counts: 5
- animal counts: 85
Safety information
risk assessment
- @ref: 9799
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | S.albidoflavus (DSM 40792) 16S rRNA gene | Z76677 | 1476 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-1) | Z77342 | 311 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-2) | Z77343 | 319 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-3) | Z77344 | 313 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-4) | Z77345 | 319 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-5) | Z77346 | 322 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-6) | Z77347 | 311 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-7) | Z77348 | 319 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-8) | Z77349 | 311 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-9) | Z77350 | 318 | nuccore | 1886 |
| 20218 | S.albidoflavus 16S-23S rDNA intergenic spacer (DSM 40792; clone-10) | Z77351 | 319 | nuccore | 1886 |
External links
@ref: 9799
culture collection no.: DSM 40792, ETH 24340, KCC S-0003, NRRL B-2663
straininfo link
- @ref: 84017
- straininfo: 297063
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9799 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40792) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40792 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 84017 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID297063.1 | StrainInfo: A central database for resolving microbial strain identifiers |