Strain identifier

BacDive ID: 149006

Type strain: No

Species: Corynebacterium amycolatum

NCBI tax ID(s): 43765 (species)

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General

@ref: 53343

BacDive-ID: 149006

keywords: Bacteria, microaerophile

description: Corynebacterium amycolatum CCUG 36714 is a microaerophile bacterium that was isolated from Human hip tissue.

NCBI tax id

  • NCBI tax id: 43765
  • Matching level: species

doi: 10.13145/bacdive149006.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Corynebacteriaceae
  • genus: Corynebacterium
  • species: Corynebacterium amycolatum
  • full scientific name: Corynebacterium amycolatum Collins et al. 1988

@ref: 53343

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Corynebacteriaceae

genus: Corynebacterium

species: Corynebacterium amycolatum

type strain: no

Culture and growth conditions

culture temp

  • @ref: 53343
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
53343microaerophile
53343obligate aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose+fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose+fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53343C14:02.414
    53343C15:00.615
    53343C16:037.716
    53343C17:01.417
    53343C18:012.218
    53343C16:1 ω7c1.915.819
    53343C16:1 ω9c0.915.774
    53343C17:1 ω8c2.216.792
    53343C18:0 3OH0.519.551
    53343C18:1 ω9c34.117.769
    53343C18:2 ω6,9c/C18:0 ANTE3.417.724
    53343C19:1 ω11c/19:1 ω9c0.218.762
    53343Unidentified0.415.931
    53343Unidentified0.518.196
    53343Unidentified1.719.968
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
53343++-+--------++--+-+-+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
53343-+++----------------

Isolation, sampling and environmental information

isolation

  • @ref: 53343
  • sample type: Human hip tissue
  • sampling date: 1996-09-05
  • geographic location: Eskilstuna
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2
#Host#Human
#Infection#Patient

External links

@ref: 53343

culture collection no.: CCUG 36714

straininfo link

  • @ref: 103478
  • straininfo: 53033

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53343Curators of the CCUGhttps://www.ccug.se/strain?id=36714Culture Collection University of Gothenburg (CCUG) (CCUG 36714)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
103478Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID53033.1