Strain identifier

BacDive ID: 148990

Type strain: No

Species: Rodentibacter pneumotropicus

NCBI tax ID(s): 758 (species)

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General

@ref: 53325

BacDive-ID: 148990

keywords: Bacteria

description: Rodentibacter pneumotropicus CCUG 36687 is a bacterium that was isolated from Murine nose.

NCBI tax id

  • NCBI tax id: 758
  • Matching level: species

doi: 10.13145/bacdive148990.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Rodentibacter
  • species: Rodentibacter pneumotropicus
  • full scientific name: Rodentibacter pneumotropicus (Jawetz 1950) Adhikary et al. 2017

  • synonyms

    • @ref: 20215
    • synonym: Pasteurella pneumotropica

@ref: 53325

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Rodentibacter

species: Rodentibacter pneumotropicus

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea+hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease+3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53325C14:018.414
    53325C16:030.516
    53325C18:01.118
    53325C13:0 ISO 2OH0.313.814
    53325C14:0 3OH/C16:1 ISO I8.115.485
    53325C16:1 ω7c37.415.819
    53325C18:1 ω7c /12t/9t1.417.824
    53325C18:1 ω9c0.917.769
    53325C18:2 ω6,9c/C18:0 ANTE1.617.724
    53325unknown 14.5030.514.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
53325-+---+----++-+-+----

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
53325-++++-+-++-+-

Isolation, sampling and environmental information

isolation

  • @ref: 53325
  • sample type: Murine nose
  • sampling date: 1996-08-01
  • geographic location: Uppsala
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Muridae (Mouse/Rat)
#Host Body-Site#Organ#Nose

External links

@ref: 53325

culture collection no.: CCUG 36687

straininfo link

  • @ref: 103465
  • straininfo: 56166

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53325Curators of the CCUGhttps://www.ccug.se/strain?id=36687Culture Collection University of Gothenburg (CCUG) (CCUG 36687)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
103465Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56166.1