Strain identifier

BacDive ID: 148966

Type strain: No

Species: Shewanella putrefaciens

NCBI tax ID(s): 24 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9 (current version):
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 9 (current version)

General

@ref: 53300

BacDive-ID: 148966

keywords: Bacteria, obligate aerobe

description: Shewanella putrefaciens CCUG 36653 is an obligate aerobe bacterium that was isolated from Water,bore hole KR0015.

NCBI tax id

  • NCBI tax id: 24
  • Matching level: species

doi: 10.13145/bacdive148966.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Shewanellaceae
  • genus: Shewanella
  • species: Shewanella putrefaciens
  • full scientific name: Shewanella putrefaciens (Lee et al. 1981 ex Derby and Hammer 1931) MacDonell and Colwell 1986

  • synonyms

    • @ref: 20215
    • synonym: Alteromonas putrefaciens

@ref: 53300

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Shewanellaceae

genus: Shewanella

species: Shewanella putrefaciens

type strain: no

Culture and growth conditions

culture temp

  • @ref: 53300
  • growth: positive
  • type: growth
  • temperature: 30

Physiology and metabolism

oxygen tolerance

  • @ref: 53300
  • oxygen tolerance: obligate aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose-assimilation
683695291gelatin+hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53300C11:00.311
    53300C12:03.212
    53300C13:0313
    53300C14:02.214
    53300C15:09.815
    53300C16:05.716
    53300C17:01.417
    53300C11:0 3OH0.812.441
    53300C12:0 3OH2.213.455
    53300C13:0 3OH/C15:1 i I/H2.614.469
    53300C13:0 iso9.212.612
    53300C13:0 ISO 2OH0.413.814
    53300C13:0 ISO 3OH1.714.11
    53300C14:0 3OH/C16:1 ISO I2.315.485
    53300C14:0 ISO1.313.618
    53300C15:0 ANTEISO0.214.711
    53300C15:0 ISO11.914.621
    53300C15:0 ISO 3OH0.316.135
    53300C15:1 ω6c214.856
    53300C15:1 ω8c3.414.792
    53300C16:1 ω7c17.915.819
    53300C16:1 ω9c1.615.774
    53300C17:0 iso0.316.629
    53300C17:1 ω6c116.862
    53300C17:1 ω8c12.716.792
    53300C18:1 ω7c /12t/9t117.824
    53300C18:1 ω9c0.617.769
    53300C18:2 ω6,9c/C18:0 ANTE0.517.724
    53300Unidentified0.319.47
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
53300+-----+--+--+++--+--+

Isolation, sampling and environmental information

isolation

  • @ref: 53300
  • sample type: Water,bore hole KR0015
  • sampling date: 1993-03-28
  • geographic location: Äspö
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic

External links

@ref: 53300

culture collection no.: CCUG 36653

straininfo link

  • @ref: 103444
  • straininfo: 57006

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53300Curators of the CCUGhttps://www.ccug.se/strain?id=36653Culture Collection University of Gothenburg (CCUG) (CCUG 36653)
68369Automatically annotated from API 20NE
103444Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID57006.1