Strain identifier

BacDive ID: 148932

Type strain: No

Species: Shewanella putrefaciens

NCBI tax ID(s): 24 (species)

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General

@ref: 53264

BacDive-ID: 148932

keywords: Bacteria, aerobe, mesophilic

description: Shewanella putrefaciens CCUG 36602 is an aerobe, mesophilic bacterium that was isolated from Water.

NCBI tax id

  • NCBI tax id: 24
  • Matching level: species

doi: 10.13145/bacdive148932.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Shewanellaceae
  • genus: Shewanella
  • species: Shewanella putrefaciens
  • full scientific name: Shewanella putrefaciens (Lee et al. 1981 ex Derby and Hammer 1931) MacDonell and Colwell 1986

  • synonyms

    • @ref: 20215
    • synonym: Alteromonas putrefaciens

@ref: 53264

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Shewanellaceae

genus: Shewanella

species: Shewanella putrefaciens

type strain: no

Culture and growth conditions

culture temp

  • @ref: 53264
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 53264
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53264C11:00.311
    53264C12:02.312
    53264C13:02.213
    53264C14:01.414
    53264C15:08.215
    53264C16:04.316
    53264C17:01.117
    53264C11:0 3OH0.612.441
    53264C12:0 3OH1.413.455
    53264C12:0 ISO 3OH0.213.098
    53264C13:0 3OH/C15:1 i I/H2.114.469
    53264C13:0 iso10.712.612
    53264C13:0 ISO 2OH0.313.814
    53264C13:0 ISO 3OH2.414.11
    53264C14:0 3OH/C16:1 ISO I1.815.485
    53264C14:0 ISO2.713.618
    53264C14:0 ISO 3OH0.315.117
    53264C15:0 ANTEISO0.514.711
    53264C15:0 ISO15.914.621
    53264C15:0 ISO 3OH0.516.135
    53264C15:1 ω6c1.814.856
    53264C15:1 ω8c2.714.792
    53264C16:0 iso0.415.626
    53264C16:1 ω7c16.515.819
    53264C16:1 ω9c1.415.774
    53264C17:0 iso0.616.629
    53264C17:1 ω6c1.316.862
    53264C17:1 ω8c14.116.792
    53264C18:1 ω7c /12t/9t117.824
    53264C18:1 ω9c0.817.769
    53264C18:2 ω6,9c/C18:0 ANTE0.317.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
53264+-----+-+---++++-+--+

Isolation, sampling and environmental information

isolation

  • @ref: 53264
  • sample type: Water
  • sampling date: 1995-05-01
  • geographic location: Lake Tranebärs
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic

External links

@ref: 53264

culture collection no.: CCUG 36602

straininfo link

  • @ref: 103413
  • straininfo: 57005

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53264Curators of the CCUGhttps://www.ccug.se/strain?id=36602Culture Collection University of Gothenburg (CCUG) (CCUG 36602)
68369Automatically annotated from API 20NE
103413Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID57005.1