Strain identifier

BacDive ID: 148748

Type strain: No

Species: Burkholderia vietnamiensis

NCBI tax ID(s): 60552 (species)

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General

@ref: 53076

BacDive-ID: 148748

keywords: Bacteria

description: Burkholderia vietnamiensis CCUG 35895 is a bacterium that was isolated from Human sputum,cystic fibrosis.

NCBI tax id

  • NCBI tax id: 60552
  • Matching level: species

doi: 10.13145/bacdive148748.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia vietnamiensis
  • full scientific name: Burkholderia vietnamiensis Gillis et al. 1995

@ref: 53076

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia vietnamiensis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    53076C14:04.714
    53076C15:00.515
    53076C16:017.816
    53076C17:00.517
    53076C18:00.518
    53076C13:1 at 12-130.612.931
    53076C14:0 2OH0.315.205
    53076C14:0 3OH/C16:1 ISO I4.715.485
    53076C15:1 ω6c0.414.856
    53076C16:0 2OH4.117.233
    53076C16:0 3OH4.317.52
    53076C16:1 2OH2.417.047
    53076C16:1 ω5c0.315.908
    53076C16:1 ω7c12.915.819
    53076C17:0 CYCLO11.616.888
    53076C18:1 2OH5.919.088
    53076C18:1 ω7c /12t/9t25.317.824
    53076C18:2 ω6,9c/C18:0 ANTE0.317.724
    53076C19:0 CYCLO ω8c2.718.9
    53076Unidentified0.318.149
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
53076+------++++++-++-++++

Isolation, sampling and environmental information

isolation

  • @ref: 53076
  • sample type: Human sputum,cystic fibrosis
  • sampling date: 1996-04-25
  • geographic location: Huddinge
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Infection#Disease#Cystic fibrosis
#Host#Human
#Infection#Patient
#Host Body Product#Fluids#Sputum

External links

@ref: 53076

culture collection no.: CCUG 35895

straininfo link

  • @ref: 103250
  • straininfo: 52170

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
53076Curators of the CCUGhttps://www.ccug.se/strain?id=35895Culture Collection University of Gothenburg (CCUG) (CCUG 35895)
68369Automatically annotated from API 20NE
103250Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID52170.1