Strain identifier

BacDive ID: 148579

Type strain: No

Species: Burkholderia vietnamiensis

NCBI tax ID(s): 60552 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 7 (current version):
version 6:
version 5:
version 4.1:
version 4:
version 7 (current version)

General

@ref: 52899

BacDive-ID: 148579

keywords: Bacteria

description: Burkholderia vietnamiensis CCUG 35665 is a bacterium that was isolated from Human sputum,cystic fibrosis,38-yr-old woman.

NCBI tax id

  • NCBI tax id: 60552
  • Matching level: species

doi: 10.13145/bacdive148579.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia vietnamiensis
  • full scientific name: Burkholderia vietnamiensis Gillis et al. 1995

@ref: 52899

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia vietnamiensis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52899C14:08.414
    52899C15:01.815
    52899C16:024.116
    52899C14:0 3OH/C16:1 ISO I5.315.485
    52899C14:1 ω5c0.313.899
    52899C15:1 ω6c0.614.856
    52899C16:0 2OH3.317.233
    52899C16:0 3OH517.52
    52899C16:1 2OH4.417.047
    52899C16:1 ω5c1.315.908
    52899C16:1 ω7c13.215.819
    52899C17:0 CYCLO16.616.888
    52899C17:0 iso 3OH0.818.161
    52899C18:1 2OH2.919.088
    52899C18:1 ω7c /12t/9t8.917.824
    52899C18:2 ω6,9c/C18:0 ANTE0.417.724
    52899C19:0 CYCLO ω8c1.518.9
    52899Unidentified0.212.943
    52899Unidentified0.113.248
    52899Unidentified0.316.091
    52899Unidentified0.216.228
    52899Unidentified0.217.16
    52899Unidentified0.318.448
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52899-+++++----++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
52899+------++++++-++-++++

Isolation, sampling and environmental information

isolation

  • @ref: 52899
  • sample type: Human sputum,cystic fibrosis,38-yr-old woman
  • sampling date: 1996-04-09
  • geographic location: Huddinge
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Sputum
#Infection#Disease#Cystic fibrosis
#Infection#Patient

External links

@ref: 52899

culture collection no.: CCUG 35665, LMG R-924

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52899Curators of the CCUGhttps://www.ccug.se/strain?id=35665Culture Collection University of Gothenburg (CCUG) (CCUG 35665)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym