Strain identifier

BacDive ID: 148514

Type strain: No

Species: Brevibacterium casei

NCBI tax ID(s): 33889 (species)

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General

@ref: 52832

BacDive-ID: 148514

keywords: Bacteria

description: Brevibacterium casei CCUG 35578 is a bacterium that was isolated from Dialysis fluid,clinical peritonitis.

NCBI tax id

  • NCBI tax id: 33889
  • Matching level: species

doi: 10.13145/bacdive148514.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Brevibacteriaceae
  • genus: Brevibacterium
  • species: Brevibacterium casei
  • full scientific name: Brevibacterium casei Collins et al. 1983

@ref: 52832

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Brevibacteriaceae

genus: Brevibacterium

species: Brevibacterium casei

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea+hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase+
68379urease+3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52832C16:00.716
    52832C18:00.318
    52832C13:0 ANTEISO0.312.701
    52832C14:0 ISO0.813.618
    52832C15:0 ANTEISO51.914.711
    52832C15:0 ISO14.414.621
    52832C16:0 iso5.115.626
    52832C17:0 anteiso23.316.722
    52832C17:0 iso1.716.629
    52832C18:2 ω6,9c/C18:0 ANTE0.917.724
    52832Unidentified0.313.241
    52832Unidentified0.418.262
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
52832-+++--+--++-+-------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52832-+++-+----+---------

Isolation, sampling and environmental information

isolation

  • @ref: 52832
  • sample type: Dialysis fluid,clinical peritonitis
  • sampling date: 1996-03-19
  • geographic location: Eskilstuna
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2
#Host Body Product#Fluids
#Infection#Disease

External links

@ref: 52832

culture collection no.: CCUG 35578

straininfo link

  • @ref: 103068
  • straininfo: 52079

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52832Curators of the CCUGhttps://www.ccug.se/strain?id=35578Culture Collection University of Gothenburg (CCUG) (CCUG 35578)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
103068Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID52079.1